DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tsp47F

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:247 Identity:61/247 - (24%)
Similarity:104/247 - (42%) Gaps:54/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKLIVYALDVLCTLLAL-VLISFGIYVAVSYNLNEI-----GQLTAYGYVGL--GAAALLVVL 61
            |.:|.:::|.:||..:..| :||:..:.:|   ::||.     |::.|...|.:  |....|:..
  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVVLA---DVNEFNHFVEGRVLAPPIVLIVTGLIIFLIAS 68

  Fly    62 WGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMS 126
            .|...|.:|:....:||.:.|.::.|.:.||.......:|.:...:.|:|:.:.:.. ||...|:
  Fly    69 LGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRS-NSEDTMA 132

  Fly   127 L--YQNWFQCCGRGSPQDY---IVNERLPPETC-------FRNHDKSKP----ENLIHTGC---- 171
            .  .|....|||..||.|:   ..|:.||...|       ...|....|    :.....||    
  Fly   133 WDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKL 197

  Fly   172 --RVEFENYWQHLTKIFNILALVLIG-------FELLLSVISCRLCNSIRND 214
              |:| :|            |::|||       .::|..|::|.|.||||.:
  Fly   198 KDRIE-KN------------AIILIGVGIGIAFIQILGIVLACYLANSIRQE 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 56/238 (24%)
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 56/238 (24%)
tetraspanin_LEL <134..205 CDD:351888 18/83 (22%)

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