Protein Alignment Tsp42Ef and lbm

DIOPT Version :10

• Sequence 1: NP_523632.2
• Gene: Tsp42Ef / 35615
• FlyBaseID: FBgn0033127
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Alignment Length: 221
• Identity: 64/221 - (28%)
• Similarity: 108/221 - (48%)
• Gaps: 19/221 - (8%)

  Fly     3 STSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLN-EIGQLTAYGYVGLGAAALLVV--LWGY 64
            :|:|||:....|:.:...||...|.:     ::||.: |..:.....|:   |.:|::|  |.|.
  Fly     4 ATTSVKIASIVLNAVLGFLAAGAIGW-----IAYNADTETEEFVIAAYI---ACSLILVFALLGI 60

  Fly    65 LSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMSLYQ 129
            .:|.||:|..|.|..:||.::.|.|. |...|...|..|.|. .:.:|..|:     ...|...|
  Fly    61 FAAIRESVVLTATSAVFLLILAILQI-VSTCLFLHEFDVKSG-RDMVEVAWQ-----ANNMDSLQ 118

  Fly   130 NWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPENLIHTGCRVEFENYWQHLTKIFNILALVLI 194
            ...:|||:.|.||||....|.|.:|:.:..:: |::|...||..:.:::::.....|.|::.||:
  Fly   119 QKHECCGQSSAQDYIHLSLLIPPSCYADLQQT-PDHLYLDGCIEKVQSFYESDKLRFIIVSWVLV 182

  Fly   195 GFELLLSVISCRLCNSIRNDARRSYF 220
            .|||:...::..|..|.:|..||..|
  Fly   183 AFELICFALAVFLAISFKNKQRRMEF 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ef	NP_523632.2	Tetraspanin	7..209	CDD:459767	57/204 (28%)
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	46/159 (29%)
		tetraspanin_LEL	<109..169	CDD:239401	18/65 (28%)