DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tsp42Ed

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_523630.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster


Alignment Length:228 Identity:50/228 - (21%)
Similarity:94/228 - (41%) Gaps:22/228 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFG-IYVAVSYNLNEIGQLTAYGYVG-----LGAAALLVVLWGYL 65
            ||.:::..::|..:..::||:|| |.|:...:.:.:|:......|.     ||....||...|..
  Fly     8 VKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFMGCC 72

  Fly    66 SAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMSLYQN 130
            .|.|||.|...::.:.:.:::::|.|::..:......:..:|...::..|::.......|...|.
  Fly    73 GAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRKTDALLMDTLQR 137

  Fly   131 WFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPEN--------LIHTGCRVEFENYWQHLTKIFN 187
            .|:|||.....||.:.  .|...|      ..|.|        :..:.|....:::|.....|..
  Fly   138 SFKCCGLNGFADYGIT--YPASCC------DSPSNGTCALTQVMTRSSCLKAVDSFWDTNVSIIK 194

  Fly   188 ILALVLIGFELLLSVISCRLCNSIRNDARRSYF 220
            ...|.:...||:..:.:|.|.|..||..||..:
  Fly   195 YAGLGVTAVELVAFIFACCLANQTRNSQRRQNY 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 45/215 (21%)
Tsp42EdNP_523630.1 Tetraspanin 8..216 CDD:459767 45/215 (21%)

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