DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and cd82a

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:254 Identity:61/254 - (24%)
Similarity:105/254 - (41%) Gaps:56/254 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKLIVYALDVLCTLLALVLISFGIY--------VAVSYNLNEIGQLTAYGYVGLGAAALLVVL 61
            ::.|..::..:.:..:....::.||::        :||....:.|.::.:|..:|:|:.::|:..
Zfish     7 TATKYFLFLFNFIFFIFGATIMGFGLWILLDNQSLIAVLQESSVILKVVSYILIGVGSFSMLLGF 71

  Fly    62 WGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQE---KTVASNLANALEATWEEELNSPG 123
            .|.|.|..|..|....:...|.|:::||.||..|:..|.   ||.|..:.:.:.|      |.||
Zfish    72 LGCLGAIYEIRCLLGLYFTCLLLILLAQVAVSILIYFQRDLLKTEADKIVSQVVA------NYPG 130

  Fly   124 -------AMSLYQNWFQCCGRGSPQDY-----IVNERLP--PETCFRNHDKS-----KPEN---- 165
                   |....|...||||.....|:     |.|..:|  |.:|   |:.|     .|:|    
Zfish   131 QNKTAEQAWDYLQRTMQCCGWNGRMDWDENHIIKNNTVPLYPCSC---HNYSIQAPIVPDNGFCQ 192

  Fly   166 -------LIHTGCRVEFENYWQHLTKIFNILALVLIG---FELLLSVISCRLCNSIRND 214
                   :..||| :|....|  |...:.|:..:.:|   .|||..:.|..||.|:..:
Zfish   193 ASSSDWPIYQTGC-LEHVGSW--LFTNYGIILGICLGVAVIELLGMIFSMGLCKSVHQE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 59/245 (24%)
cd82aNP_997826.3 None

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