DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and cd9a

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:230 Identity:47/230 - (20%)
Similarity:94/230 - (40%) Gaps:42/230 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEI--GQLTAY-----GYVGLGAAALLVVL--W 62
            ||.:::..:.:..:....:::.|:::........:  |:.:.|     .|:.:.|.||::|:  :
Zfish    11 VKYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLFEGENSPYVFYTGVYILIAAGALMMVVGFF 75

  Fly    63 GYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATW-------EEELN 120
            |...|.:|:.|....|..||.::...:.|......:.:..|..::......|:       :|.|.
Zfish    76 GCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGFSNQTKVTEDITTFYRQTYDTYQQSKQEALK 140

  Fly   121 SPGAMSLYQNWFQCCG-RGSPQDYIVNERLPPETCFRNHDKSKPENLIHTGCRVEFENYWQHLTK 184
            .  .:.|:|:...||| .|:.|:.:      .|||.:   |...:|||...|.       ..:.:
Zfish   141 K--TLRLFQHGLNCCGPSGNMQESL------DETCPK---KEGLDNLIIKSCP-------DAIDE 187

  Fly   185 IFNILALVLIGFELLLSVI-------SCRLCNSIR 212
            :||....::.|..:...||       |..||.:||
Zfish   188 VFNSKLHIIGGVGIATGVIMIFGMIFSMMLCCAIR 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 44/225 (20%)
cd9aXP_005159038.1 Tetraspanin 11..219 CDD:459767 44/225 (20%)
CD9_LEL 110..193 CDD:239405 21/100 (21%)

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