Protein Alignment Tsp42Ef and Tspan6

DIOPT Version :10

• Sequence 1: NP_523632.2
• Gene: Tsp42Ef / 35615
• FlyBaseID: FBgn0033127
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001094142.1
• Gene: Tspan6 / 302313
• RGDID: 1560160
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 238
• Identity: 53/238 - (22%)
• Similarity: 99/238 - (41%)
• Gaps: 50/238 - (21%)

  Fly     9 LIVYALDVLCTLLALVLISFGIYVAVSYN-----LNEIGQLTAYGYVGLGAAALLVVLWGYLSAW 68
            |::|..  :..:..::|::.||:..||..     |||......:..:|.|...:|:..:|..:..
  Rat    21 LLIYTF--IFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPFVLIGTGTVIILLGTFGCFATC 83

  Fly    69 RENVCCTVTFIIFLCLVIIAQF--AVVYLLITQE--KTVASNLANALEATWEEELNS-----PGA 124
            |.:......:.:||.|:.:.:.  |:|..:...|  .:..||..|||     :|.||     ..|
  Rat    84 RASAWMLKLYAMFLTLIFLVELVAAIVGFVFRHEIKNSFKSNYENAL-----KEYNSTRDYRSEA 143

  Fly   125 MSLYQNWFQCCGRGSPQDY----IVNERLPPETCF--------RNHDKSKPENLIHTGCRVEFEN 177
            :...|:...|||..:.:|:    ..:|...|::|.        |:.||...|     ||.::.
  Rat   144 VDKIQSTLHCCGVTNYRDWKGTNYYSETGFPKSCCKLEGCYPQRDADKVNEE-----GCFIKV-- 201

  Fly   178 YWQHLTKI---FNILALVLIG---FELLLSVISCRLCNSIRND 214
                :|.|   ..::|.:..|   |:|:...::..|..:|.|:
  Rat   202 ----MTTIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ef	NP_523632.2	Tetraspanin	7..209	CDD:459767	51/231 (22%)
Tspan6	NP_001094142.1	Tetraspanin	17..235	CDD:459767	51/231 (22%)
		TM4SF2_6_like_LEL	112..209	CDD:239414	26/112 (23%)