DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan7

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_062608.2 Gene:Tspan7 / 21912 MGIID:1298407 Length:249 Species:Mus musculus


Alignment Length:226 Identity:48/226 - (21%)
Similarity:90/226 - (39%) Gaps:26/226 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIVYALDVLCT---LLALVL---ISFGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLWGYLSA 67
            ||:|:.....|   |||:.:   ::.|.|:::   :.|......|..:|.|...::..|:|..:.
Mouse    19 LIIYSFVFWITGVILLAVGVWGKLTLGTYISL---IAENSTNAPYVLIGTGTTIVVFGLFGCFAT 80

  Fly    68 WRENVCCTVTFIIFLCLVIIAQF-AVVYLLITQEKTVASNLANALEATWEEELNS--PGAMSLYQ 129
            .|.:......:.:||.||.:|:. |.:...:.:.:...:.|....:|......|.  ..|:...|
Mouse    81 CRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQNYNGNDERSRAVDHVQ 145

  Fly   130 NWFQCCG-----RGSPQDYIVNERLPPETCFRNHDKSKPE--NLIHTGCRVEFENYWQHLTKI-- 185
            ....|||     ..|...|.::..:||..|....|.:..:  ||.....:|..:..:..:|..  
Mouse   146 RSLSCCGVQNYTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFME 210

  Fly   186 --FNILALVLIGF---ELLLSVISCRLCNSI 211
              ..|:|.|..|.   :|:..:::|.|...|
Mouse   211 TNMGIIAGVAFGIAFSQLIGMLLACCLSRFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 47/222 (21%)
Tspan7NP_062608.2 Tetraspanin 15..239 CDD:459767 47/222 (21%)
TM4SF2_6_like_LEL 110..213 CDD:239414 18/102 (18%)

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