DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tsp-8

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:273 Identity:63/273 - (23%)
Similarity:109/273 - (39%) Gaps:73/273 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQL-----TAYGYVG---LGAAALLVVL 61
            ::::::.:..:....|..:|:...||::......::...|     .|:.|||   :||.|:::::
 Worm     6 NALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGAIIILV 70

  Fly    62 --WGYLSAWRENVCCTVTFIIFLCLVIIAQF----AVVYLLITQEKT---VASNLANALEATWEE 117
              :|.:.||:.|.|   ....|.|::|:|.|    |.|.|...||..   |.|::.:.:...:..
 Worm    71 GYFGCIGAWKMNQC---ALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSS 132

  Fly   118 ELNSPGAMSLYQNWFQCCGRGSPQDYI-------------VNE----RLP--------------- 150
            |.....|....|..|:|||..:..|::             |||    |:.               
 Worm   133 ETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGYG 197

  Fly   151 --PETCFRNHDK-SKPEN---------------LIHT-GCR-VEFENYWQHLTKIFNILALVLIG 195
              |.:|...|.| |.|.|               .|:| ||. ..:|:....|:.|..: .:||..
 Worm   198 RVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGV-CVVLCI 261

  Fly   196 FELLLSVISCRLC 208
            .:||..|:|..||
 Worm   262 VQLLGIVLSMTLC 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 63/271 (23%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 34/145 (23%)
tetraspanin_LEL 108..243 CDD:239401 27/134 (20%)

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