DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Cd63

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_031679.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus


Alignment Length:240 Identity:68/240 - (28%)
Similarity:103/240 - (42%) Gaps:49/240 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYV------AVSYNLNEIGQLTAYGYVGLGAAALLVVLWGYL 65
            ||.::|.|.:.....|:.||:.|:.|      |:::. ...|.|.....:.:||...||...|..
Mouse    10 VKFLLYVLLLAFCACAVGLIAIGVAVQVVLKQAITHE-TTAGSLLPVVIIAVGAFLFLVAFVGCC 73

  Fly    66 SAWRENVCCTVTFIIFLCLVIIAQFAVV---YLLITQ-----EKTVASNLANALE----ATWEEE 118
            .|.:||.|..:||.|||.|:::.:.||.   |:...|     .|:....:.|.|:    ||..::
Mouse    74 GACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFNKSFQQQMQNYLKDNKTATILDK 138

  Fly   119 LNSPGAMSLYQNWFQCCGRGSPQDY-----IVNERLPPETCFR------NHDKSKPENLIHT-GC 171
            |         |....|||..:..|:     :..:|:|...|..      |..|   |:.||| ||
Mouse   139 L---------QKENNCCGASNYTDWENIPGMAKDRVPDSCCINITVGCGNDFK---ESTIHTQGC 191

  Fly   172 RVEFENYWQHLTKIFNILALVLIGF---ELLLSVISCRLCNSIRN 213
             ||....|  |.|...::|...:|.   |:|..:.||.|..|||:
Mouse   192 -VETIAIW--LRKNILLVAAAALGIAFVEVLGIIFSCCLVKSIRS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 65/234 (28%)
Cd63NP_031679.1 Tetraspanin 10..229 CDD:459767 65/234 (28%)
CD63_LEL 105..203 CDD:239419 29/112 (26%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 68/240 (28%)

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