DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and LOC101730599

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_017947977.1 Gene:LOC101730599 / 101730599 XenbaseID:XB-GENE-29084703 Length:311 Species:Xenopus tropicalis


Alignment Length:213 Identity:50/213 - (23%)
Similarity:81/213 - (38%) Gaps:57/213 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLW------- 62
            |...|..|:  .|.:|:.||::..|||.......:.    |..| :.|..|.:|::|.       
 Frog    17 SKFSLSFYS--TLFSLIGLVILCIGIYAESERQKHR----TLEG-IFLAPAVILLLLGIIMFAVS 74

  Fly    63 --GYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNL-----ANALEA--TWEEE 118
              |.:.:.|:|:.....|.    .|::|.|.:..|||..|....:.:     ||.|..  .:.::
 Frog    75 FIGMVGSLRDNILLVKLFF----WVLLAIFLIELLLIIIELVFENQMKKFAHANILVGMQQYYDD 135

  Fly   119 LNSPGAMSLYQNWFQCCGRGSPQDYIVNERLP-----------PETC----------------FR 156
            |:....|...|..|.|||....:|:.||:...           |.||                ::
 Frog   136 LDFKNIMDFVQEKFSCCGGDDFKDWKVNQYHSCNSTGPLACGVPYTCCITGKESGGVKNTLCGYQ 200

  Fly   157 NHDKSKPE--NLIHT-GC 171
            ..||.:.|  ::||. ||
 Frog   201 TLDKERLEVHSIIHVRGC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 49/211 (23%)
LOC101730599XP_017947977.1 Tetraspanin 17..>154 CDD:459767 36/147 (24%)
penumbra_like_LEL 112..230 CDD:239411 23/107 (21%)

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