DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and TSPAN3

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:241 Identity:57/241 - (23%)
Similarity:93/241 - (38%) Gaps:34/241 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSSVKLIVY-------ALDVLCTLLALVLISFGIY---VAVSYNLNEIGQLTAYGYVGLGAAALL 58
            |||..::|:       |..:||.:.|.|.|::..|   ....|.|     :.|...:.:||...:
Human     7 TSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTL-----IPAVVIIAVGALLFI 66

  Fly    59 VVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEE-ELNSP 122
            :.|.|..:..||:.|...||:|.|.||.:.:..||.|.......|.:.:..:::..::. ...:|
Human    67 IGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNP 131

  Fly   123 GAMS----LYQNWFQCCGRGSPQDY--------IVNERLPPETCFR-----NHDKSKPENLIHTG 170
            .|.|    ..|....|||..:..|:        ..|:.:|...|..     |...:.|.:|...|
Human   132 DAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEG 196

  Fly   171 CRVEFENYWQHLTKIFNILALVLIGFELLLSVISC-RLCNSIRNDA 215
            |........|.:.......||.....:||..:.:| .||...|:.|
Human   197 CEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPA 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 51/230 (22%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 51/230 (22%)
TM4SF8_like_LEL 104..210 CDD:239416 18/105 (17%)

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