DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tspan9

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_012813987.1 Gene:tspan9 / 100144960 XenbaseID:XB-GENE-956624 Length:326 Species:Xenopus tropicalis


Alignment Length:233 Identity:44/233 - (18%)
Similarity:94/233 - (40%) Gaps:27/233 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAY--GYVGLGAAALLVVL-------- 61
            :|.:::..:::..|....|:..||:::||.     |....:  .:..|.||.|::.:        
 Frog    96 LKYMMFLFNLIFWLCGCGLLGVGIWLSVSQ-----GNFATFSPSFPSLSAANLVIAIGTIVMVTG 155

  Fly    62 -WGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALE-----ATWEEELN 120
             .|.|.|.:||.|..::|.|.|.::::|:..::.|.......|..|....|:     ...|..:.
 Frog   156 FLGCLGAIKENKCLLLSFFIILLIILLAELILLILFFVYMDKVNENAKQDLKDGLLLYNTENNVG 220

  Fly   121 SPGAMSLYQNWFQCCGRGSPQDY--IVNERLPPETCFRNHDKSKPEN----LIHTGCRVEFENYW 179
            ...|.::.|....|||.....|:  ::.|...|:.|...:.:....|    :..|||..:.:.::
 Frog   221 LKNAWNIIQAEMHCCGVTDYTDWYPVLGENTVPDRCCMENSQDCGHNSTSLVWKTGCYEKVKMWF 285

  Fly   180 QHLTKIFNILALVLIGFELLLSVISCRLCNSIRNDARR 217
            .....:...:.:.::..::|....|..|...|....::
 Frog   286 DDNKHVLGTIGMCILIIQILGMAFSMTLFQQIHRTGKK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 43/223 (19%)
tspan9XP_012813987.1 Tetraspanin 96..315 CDD:459767 43/223 (19%)
NET-5_like_LEL 192..289 CDD:239418 17/96 (18%)

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