DRSC/TRiP Functional Genomics Resources

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Protein Alignment vimar and vimar

DIOPT Version :10

Sequence 1:NP_995767.1 Gene:vimar / 35609 FlyBaseID:FBgn0022960 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_061504478.1 Gene:vimar / 1274980 VectorBaseID:AGAMI1_008742 Length:623 Species:Anopheles gambiae


Alignment Length:642 Identity:363/642 - (56%)
Similarity:465/642 - (72%) Gaps:31/642 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AEIDDLIEKLK--TTSVSPANTTNLLCEISATKDPKLFDKHELAECFLGLTKCDDTNVRKEAAKC 66
            ||:|::|..||  |...|......||.::| ..:..|.||:::....|.|.:..|..|:.:.|:|
Mosquito     3 AEMDEIIAGLKNATLEKSSERALPLLKQLS-DAETNLCDKYDIKNDLLELLQLPDAGVQIQVARC 66

  Fly    67 IAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSDG-------SMELPIQICRALGNICYLNDEAR 124
            |||:.|:|.||.||:|.:||....|.|:.....:|       ::||..|||||||||||.|||||
Mosquito    67 IAEVAKTEHQRTKFSKEDIIRRLTELLQSPAAQNGGNATDRAALELATQICRALGNICYANDEAR 131

  Fly   125 DLILELEGDAVLLRLLDITTIEDVANAAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGII 189
            ::|.||..|.....|||.....|..:..||::||.||:||||||.:.:|:||:||.::.:|:.|:
Mosquito   132 NIIKELGADERFFALLDYDVDTDDEDREQFVRVRCGLISNYLLGSDEIAERAVELKLIDRLERIL 196

  Fly   190 DIGASNVEQHEDLLLNTLPLLSILTENVSDLNFDSSLNIQLSRILAASTNPDLAEMCLELLHYQA 254
            .....:|::||:|||:.||.||||||.:|||.|..|||..:::|||..||||:||.||.||||:|
Mosquito   197 TRCLCDVDRHEELLLSILPPLSILTEQISDLYFAPSLNKTIAQILAKCTNPDIAESCLALLHYEA 261

  Fly   255 ESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARALMKLACELIVLILTGDDSMHYLYTTPLLK 319
            ::|:|||:||::|||||||.|||||||.|:|.|||.||||||:|||||||||.||||||:|||||
Mosquito   262 QNDDVKLLLAEEGLCETIYQLLEKYKTFANTDEARVLMKLACDLIVLILTGDKSMHYLYSTPLLK 326

  Fly   320 NMVDWLDSTDIDLLTTGVLALGNFARTDSHCIYFVEQQTMNKLLEVLAKNNGVKDDVRLQHALLS 384
            .|.|||||:|::||||||||||||||||||||:.||.:.|:|||.:||||||.:..:.|||||||
Mosquito   327 CMEDWLDSSDVELLTTGVLALGNFARTDSHCIHMVENKIMHKLLAILAKNNGTEHQMTLQHALLS 391

  Fly   385 ALRNLVIPKPNKNAVIQAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALELLKNKTLIE 449
            .|:|||||||||.|||:||||..|||||||||.||||||||||||||||||.||.:||:|:.|::
Mosquito   392 TLKNLVIPKPNKAAVIEAGLVDIILPMLEIHQAPVVFKLLGTLRMTVDGQENLASQLLQNEKLVK 456

  Fly   450 QLVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIADKIPLTQDYDRSSLS 514
            ||||||::|::.||.|||||||||||||||         ::.|:.|:...|.         :.|.
Mosquito   457 QLVHWSQTSEFTGVLGESLRLMAWLIKHAY---------QQRDSSAKAAMDD---------TGLR 503

  Fly   515 EFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSVVYLSQPSEAAQAQLLQDELVKCEVGKKLA 579
            :|:|.||.|.:||.||.:.||||||||||||.||:.:|.|:  .|:::..|.:.||:.:||.|||
Mosquito   504 KFVAIEGAVASMVGMLASTHLVMQNEALIALSILTTLYHSK--AASESNTLDELLVQADVGAKLA 566

  Fly   580 ELISKSSDTMTKEIVENLQNCVNLLK-SSEQLVAHLEQHNINELLKSIPILTEYCTL 635
            |.|:.:.::||||:|||||..|.||: ||:.|||||.||||.||||:||.|.|||||
Mosquito   567 EQITLNGESMTKELVENLQTFVKLLRSSSDALVAHLRQHNIEELLKTIPSLVEYCTL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vimarNP_995767.1 armadillo repeat 77..118 CDD:293788 20/47 (43%)
armadillo repeat 124..165 CDD:293788 16/40 (40%)
armadillo repeat 318..343 CDD:293788 19/24 (79%)
armadillo repeat 351..391 CDD:293788 23/39 (59%)
armadillo repeat 396..428 CDD:293788 26/31 (84%)
vimarXP_061504478.1 None

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