Protein Alignment vimar and rap1gds1

DIOPT Version :10

• Sequence 1: NP_995767.1
• Gene: vimar / 35609
• FlyBaseID: FBgn0022960
• Length: 635
• Species: Drosophila melanogaster
• Sequence 2: XP_073763659.1
• Gene: rap1gds1 / 100334870
• ZFINID: ZDB-GENE-101230-2
• Length: 607
• Species: Danio rerio
• Alignment Length: 662
• Identity: 193/662 - (29%)
• Similarity: 314/662 - (47%)
• Gaps: 101/662 - (15%)

  Fly     7 DDLIEKLKTTSVSPANTTN-----LLCEISATKDPKLFDKHELAECFLGL-----------TKCD 55
            |:|.|.|||..:|.|..::     |.|.:.|.....:....::.|  :|:           ..|
Zfish     3 DNLSEALKTLKLSSAGASDSVEGCLDCLLKALAHNNVETSEKIQE--MGVLASMPALLSVQNSC- 64

  Fly    56 DTNVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSDGSMELPIQICRALGNICYLN 120
                ..:.|..|||:.|:|..|....:..:|...::.|     :....|:.:|..||||||||.:
Zfish    65 ----TSKVANIIAEVAKNEFMRSPCVEAGLIPPLVQLL-----NSKDQEILLQTGRALGNICYDS 120

  Fly   121 DEARDLILELEGDAVLL--RLLDITTIEDVANAAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMK 183
            .|.|..: :..|.|.::  .:..:....|.| ..:.:.|..|:|.||....:.|..:.:.:||:.
Zfish   121 HEGRSAV-DAAGGAQIVTEHIKSLAESTDPA-TGKLLTVFCGMLMNYSNDNDSLQAQLISMGVIP 183

  Fly   184 KLQGIIDIGASNVEQHEDLLLNTLPLLSILTENVSDLNFDSSLNI--QLSRILAASTNPDLAEMC 246
            .|..::.:.:.|....|..|:    ....|.|..|.....:|.||  :|.|:.......:..||.
Zfish   184 TLVRLLGVHSQNTPLTEMCLI----AFGNLAELESSKEQFASTNIAEELVRLFRKQAEHEKKEMI 244

  Fly   247 LELLHYQAESDEVKLILAKDGLCETIYNLLEKYKTLAS-TSEARALMKLACELIVLILTGDDSMH 310
            .|:|...||:|.:||.|...||.|.:..::.  :|:.| ..|..|.:|.|.:|:||:|.||:||.
Zfish   245 FEVLAPLAENDVIKLQLVDAGLVECLLEVVA--QTVNSEREEDAAQLKTASDLMVLLLLGDESMQ 307

  Fly   311 YLY---TTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHCIYFVEQQTMNKLLEVLAKNNGV 372
            .|:   ...:.:.::.|:.|.:..|...|.||:.||||.|.:||:.|:...:.||||:|.::  |
Zfish   308 KLFEGGKGSVFQRVLSWVPSNNHQLQLAGALAIANFARNDGNCIHMVDTGIVQKLLELLDRH--V 370

  Fly   373 KD-DVRLQHALLSALRNLVIPKPNKNAVIQAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEK 436
            :: :|.:|||.|||||||.||..||:.::.||:...:|..|:...|||.|||||||||.:|.|..
Zfish   371 EEGNVTVQHAALSALRNLAIPVVNKSKMLLAGVSDVVLKFLKSEMPPVQFKLLGTLRMLIDTQAD 435

  Fly   437 LALELLKNKTLIEQLVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIADK 501
            .|.:|..|..|:|:||.|.::.|:|||.|||.||::.||:|:...::.
Zfish   436 AAEQLGTNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSKEVV----------------- 483

  Fly   502 IPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSVVYLSQPSEAAQAQLLQ 566
                         ..:...|.|:.:|.|.|::|::||||||:||.:::.::|    :.|:...:.
Zfish   484 -------------RTVIQGGGVKHLVLMATSEHMIMQNEALVALGLIAALHL----DCAEKDFVS 531

  Fly   567 DELVKCEVGKKLAELISKSSDTMTKEIVENLQNCVNLLKSSEQL------------VAHLEQHNI 619
            ..||..     |.:|:::  :....||..|....:..:..||.|            |:.|..|.
Zfish   532 SSLVTV-----LHKLLTE--EHSAPEIKYNSMILICSIMGSEPLHKEVQSLAFIDVVSGLRSHE- 588

  Fly   620 NELLKSIPILTE 631
            |:.:.....|||
Zfish   589 NKTVSHQASLTE 600

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vimar	NP_995767.1	armadillo repeat	77..118	CDD:293788	11/40 (28%)
		armadillo repeat	124..165	CDD:293788	8/42 (19%)
		armadillo repeat	318..343	CDD:293788	6/24 (25%)
		armadillo repeat	351..391	CDD:293788	19/40 (48%)
		armadillo repeat	396..428	CDD:293788	14/31 (45%)
rap1gds1	XP_073763659.1	None