Protein Alignment coro and ribD

DIOPT Version :10

• Sequence 1: NP_001260743.1
• Gene: coro / 35596
• FlyBaseID: FBgn0265935
• Length: 535
• Species: Drosophila melanogaster
• Sequence 2: NP_414948.1
• Gene: ribD / 945620
• ECOCYCID: EG11321
• Length: 367
• Species: Escherichia coli
• Alignment Length: 261
• Identity: 56/261 - (21%)
• Similarity: 90/261 - (34%)
• Gaps: 82/261 - (31%)

  Fly    43 NPKFLAIIV---ESAGGGAFIVLPHNKVGRIAAD-HPL-VGGHKG----PVLDIAWCPHN----- 93
            ||....:||   |..|.|.     |.:.|...|: |.| :.|.|.    ..:.:..|.|:
E. coli    24 NPNVGCVIVKDGEIVGEGY-----HQRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPP 83

  Fly    94 --DNVIASGSEDCVVKVW----QIPDGGLSRTLTEPVVDLVFHQRRVGLVLWHPSALNVLLTAGS 152
              |.:||:|....|..:.    |:...||.| |.:..:| |.|    ||::.....|
E. coli    84 CCDALIAAGVARVVASMQDPNPQVAGRGLYR-LQQAGID-VSH----GLMMSEAEQL-------- 134

  Fly   153 DNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGSKLVTTCKDKKIRIYDPRTAELESEAMCHEG 217
             |:..:..:.||...:.:..             |:.|            |.|||....|:.....
E. coli   135 -NKGFLKRMRTGFPYIQLKL-------------GASL------------DGRTAMASGESQWITS 173

  Fly   218 SKATRAIFL----RHGLI------------FTTGFNRSSERQYSLRAPDALNEPIVMVELDTSNG 266
            .:|.|.:.|    .|.::            .|..::...|:..:|.....|.:||.:| :|:.|.
E. coli   174 PQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIV-IDSQNR 237

  Fly   267 V 267
            |
E. coli   238 V 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
coro	NP_001260743.1	WD40	9..>392	CDD:475233	56/261 (21%)
		WD40 repeat	37..78	CDD:293791	12/39 (31%)
		WD40 repeat	85..129	CDD:293791	13/54 (24%)
		WD40 repeat	134..171	CDD:293791	6/36 (17%)
		WD40 repeat	178..213	CDD:293791	7/34 (21%)
		WD40 repeat	220..260	CDD:293791	10/55 (18%)
		WD40 repeat	267..308	CDD:293791	1/1 (100%)
ribD	NP_414948.1	ribD	1..367	CDD:182729	56/261 (21%)