DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment coro and CORO1B

DIOPT Version :10

Sequence 1:NP_001260743.1 Gene:coro / 35596 FlyBaseID:FBgn0265935 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_065174.1 Gene:CORO1B / 57175 HGNCID:2253 Length:489 Species:Homo sapiens


Alignment Length:507 Identity:270/507 - (53%)
Similarity:353/507 - (69%) Gaps:28/507 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFR-VVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFIVLPH 64
            |||| |||.||||||:||.:|.:|||::||||:.:||||||||||||||:|||::|||||:|||.
Human     1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPL 65

  Fly    65 NKVGRIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDLVF 129
            :|.|||...:|.|.||.||||||.||||||.|||||||||.|.|||||:.||:..||||||.|..
Human    66 SKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

  Fly   130 HQRRVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDS-HPDIVYSACFNWDGSKLVTTC 193
            |.:|||::.|||:|.||||:||.||.|:||||||.|.|..:|| |||::|:..:|.:||...:.|
Human   131 HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSAC 195

  Fly   194 KDKKIRIYDPRTAELESE-AMCHEGSKATRAIFLRHGLIFTTGFNRSSERQYSLRAPDALNEPIV 257
            |||.:||.|||...|.:| ...|||::..|||||..|.:|||||:|.||||.:|..|:.|.||:.
Human   196 KDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALWDPENLEEPMA 260

  Fly   258 MVELDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKR 322
            :.|||:|||.:.|.||.||:::|:||||||.|||||:|.|||::|::|||.:.|||||:|.||||
Human   261 LQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPPYIHFLNTFTSKEPQRGMGSMPKR 325

  Fly   323 GCDVTTCEVAKFYRMNNNGLCQVISMTVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDADPIT 387
            |.:|:.||:|:||:::.. .|:.|.|||||||||||:||||||...:||:.||||:.|:|||||.
Human   326 GLEVSKCEIARFYKLHER-KCEPIVMTVPRKSDLFQDDLYPDTAGPEAALEAEEWVSGRDADPIL 389

  Fly   388 FSLKDRVSIVQGGYVSSSVNKSLPAKKAGNILNKPR-----GDSASSGATSSSAGGGNFASGNNN 447
            .||::       .||.|. .:.|...:. |:|:..|     |.|......|::.......||:..
Human   390 ISLRE-------AYVPSK-QRDLKISRR-NVLSDSRPAMAPGSSHLGAPASTTTAADATPSGSLA 445

  Fly   448 EASEGGPPAAVLSEKDLRTIQDEIRKLKAIIVKQENRIRALEAKEDARNKNG 499
            .|.|.|         .|..:..|:|.|:|::.:|.:||..|| ::..|.:||
Human   446 RAGEAG---------KLEEVMQELRALRALVKEQGDRICRLE-EQLGRMENG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coroNP_001260743.1 WD40 9..>392 CDD:475233 235/384 (61%)
WD40 repeat 37..78 CDD:293791 28/40 (70%)
WD40 repeat 85..129 CDD:293791 33/43 (77%)
WD40 repeat 134..171 CDD:293791 23/36 (64%)
WD40 repeat 178..213 CDD:293791 15/35 (43%)
WD40 repeat 220..260 CDD:293791 21/39 (54%)
WD40 repeat 267..308 CDD:293791 24/40 (60%)
CORO1BNP_065174.1 WD40 10..485 CDD:475233 261/494 (53%)
WD 1 18..72 37/53 (70%)
WD40 repeat 38..80 CDD:293791 29/41 (71%)
WD 2 73..122 33/48 (69%)
WD40 repeat 86..130 CDD:293791 33/43 (77%)
WD 3 123..166 28/42 (67%)
WD40 repeat 135..172 CDD:293791 23/36 (64%)
WD 4 167..210 19/42 (45%)
WD40 repeat 180..215 CDD:293791 15/34 (44%)
WD 5 211..256 22/44 (50%)
WD40 repeat 223..263 CDD:293791 21/39 (54%)
WD 6 257..296 23/38 (61%)
WD40 repeat 270..311 CDD:293791 24/40 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..444 8/36 (22%)

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