DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zip42C.2 and slc39a10

DIOPT Version :9

Sequence 1:NP_610231.2 Gene:Zip42C.2 / 35580 FlyBaseID:FBgn0033097 Length:310 Species:Drosophila melanogaster
Sequence 2:XP_002937754.1 Gene:slc39a10 / 100493171 XenbaseID:XB-GENE-1221212 Length:834 Species:Xenopus tropicalis


Alignment Length:459 Identity:81/459 - (17%)
Similarity:149/459 - (32%) Gaps:204/459 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VAKIVAIVVLFLVTLI-FCFIPYLLDRFYKWTQRPENNAREFKVVLCLLNF----GGGVLIATTF 67
            :..:::|.|:.|::|: ...||.:....:|:                ||||    ..|.|.....
 Frog   409 ICGLISITVISLLSLLGVILIPIINQGCFKY----------------LLNFLVALAVGTLSGDAL 457

  Fly    68 IHMLPEV-------VEVVN----------ALQDCRMLAPTPFGLPEVLLCTGFYLMYCIEETM-- 113
            :|:||..       .|..|          ..:|...|:.....:..::...|.||::.:|..:  
 Frog   458 LHLLPHSQGGHDHGTEAPNHSHEHNHESLHSEDQSFLSEYDGVMKGLVALGGIYLLFIVENCLWM 522

  Fly   114 --HFVVR-------RRQQR------------------------KLREVVTIKDA----GEEL-RT 140
              |:..|       :|:|:                        :|:.:..::|:    .::| :|
 Frog   523 FKHYKERMGKRKWLKRKQKLDEAAVGRKLSDHSSNRRSDAEWLQLKPLEAMQDSVTCENQQLNQT 587

  Fly   141 EI-----VVQPE----------------------------------------ESPKEPN------ 154
            |:     |:|..                                        |.||:.|      
 Frog   588 EMTYVENVLQSPAKVFIPADERTAHANKDASHYDDDNHSLQDGQYENNHEKMEVPKKHNHNKHSH 652

  Fly   155 ---------------------WLRGLGIIVALSLHELFGGMAIGLEMSVSTVWFMTGAISVHKLV 198
                                 |:    :|:...:|....|:|||...|..    :||.||..  |
 Frog   653 HSHGHCHSGKDMKDTGIASIAWM----VIMGDGMHNFSDGLAIGAAFSAG----ITGGISTS--V 707

  Fly   199 LAFC---------------IGMEIMMAHTRWLLAVVYLLVFSIVTPIGVGIGIAVSESAAANQPS 248
            ..||               .||.:..       |:||.|:.:::..:|:.||.||.:.|     :
 Frog   708 AVFCHELPHELGDFAVLLKAGMTVKQ-------AIVYNLLSAMMAYVGMLIGTAVGQYA-----N 760

  Fly   249 TVSGILQGLACGTLIYVVFFEIVAK-----------NHAGIR--IL--LSSMVGFVLMFGLQIAI 298
            .::..:..:..|..:||...:::.:           .|..:.  ||  |..::||.:|  |.||:
 Frog   761 NITLWIFAITAGMFLYVALVDMLPEMLHGDGEHEENGHCAVGQFILKNLGLLLGFTIM--LLIAL 823

  Fly   299 GEAK 302
            .|.|
 Frog   824 YEDK 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zip42C.2NP_610231.2 Zip 9..294 CDD:280666 76/448 (17%)
slc39a10XP_002937754.1 Zip 405..822 CDD:308248 77/452 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.