DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and AT4G34950

DIOPT Version :10

Sequence 1:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_195221.1 Gene:AT4G34950 / 829647 AraportID:AT4G34950 Length:567 Species:Arabidopsis thaliana


Alignment Length:289 Identity:65/289 - (22%)
Similarity:115/289 - (39%) Gaps:42/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LPLTPAPANTPLHKAIK---HDLFPEVTFCNLSVEELADGAGHSRVVRS-SVIELEDGTMTCLMN 100
            |.|..:|...|.|..|:   ||            |:..:|.....::|| |.||:|:..:.....
plant   251 LILLASPVAVPFHAFIRSKVHD------------EQDVEGRIDEPLLRSGSEIEVEETIVGAAAA 303

  Fly   101 GNGQVKRRKRLISNESGDSIDS-SSTEKKTPKMPDGGYGWVVVFASLVVSLIADGLSFSFGL-IN 163
            .:.::....:.:|||..::..: .:||||.|.:   |....::.|.|.|......:||..|: ..
plant   304 ADNELPPSLKPLSNEEEENHGTIVTTEKKRPVL---GEEHTIMEAMLTVDFWVLFVSFLCGVGTG 365

  Fly   164 VELLEYFGESTSKTAWIS-SLFFSVP--------LLMGPIWSNLVDKYGCRK--MTILGGVVSAF 217
            :.::...|:......:.. |:|.|:.        :|.|.|..:.:.|.|..:  ......::.|.
plant   366 LAVMNNMGQIGLALGYTDVSIFVSMTSIWGFFGRILSGTISEHFIKKAGTPRPLWNAAAQIIMAV 430

  Fly   218 GFALSSFC--NSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVY 280
            |:.|.:..  .|:.:..:..|:..|:.|.|...||  |..|.. |.......|......:|:|::
plant   431 GYLLMALALPGSLYIGSMVVGVCYGVRLAITVPTA--SELFGL-KYYGLIYNILILNMPLGSFLF 492

  Fly   281 ARLTSYLIESYGWRGATLILGGTMLNACV 309
            :.|.:.|:..   ..||...||.  |.||
plant   493 SGLLAGLLYD---AEATPTPGGG--NTCV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 40/186 (22%)
MFS <687..869 CDD:475125
AT4G34950NP_195221.1 MFS_Mch1p_like 15..536 CDD:340912 65/289 (22%)
Blue background indicates that the domain is not in the aligned region.

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