DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and AT4G34950

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_195221.1 Gene:AT4G34950 / 829647 AraportID:AT4G34950 Length:567 Species:Arabidopsis thaliana


Alignment Length:289 Identity:65/289 - (22%)
Similarity:115/289 - (39%) Gaps:42/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LPLTPAPANTPLHKAIK---HDLFPEVTFCNLSVEELADGAGHSRVVRS-SVIELEDGTMTCLMN 100
            |.|..:|...|.|..|:   ||            |:..:|.....::|| |.||:|:..:.....
plant   251 LILLASPVAVPFHAFIRSKVHD------------EQDVEGRIDEPLLRSGSEIEVEETIVGAAAA 303

  Fly   101 GNGQVKRRKRLISNESGDSIDS-SSTEKKTPKMPDGGYGWVVVFASLVVSLIADGLSFSFGL-IN 163
            .:.::....:.:|||..::..: .:||||.|.:   |....::.|.|.|......:||..|: ..
plant   304 ADNELPPSLKPLSNEEEENHGTIVTTEKKRPVL---GEEHTIMEAMLTVDFWVLFVSFLCGVGTG 365

  Fly   164 VELLEYFGESTSKTAWIS-SLFFSVP--------LLMGPIWSNLVDKYGCRK--MTILGGVVSAF 217
            :.::...|:......:.. |:|.|:.        :|.|.|..:.:.|.|..:  ......::.|.
plant   366 LAVMNNMGQIGLALGYTDVSIFVSMTSIWGFFGRILSGTISEHFIKKAGTPRPLWNAAAQIIMAV 430

  Fly   218 GFALSSFC--NSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVY 280
            |:.|.:..  .|:.:..:..|:..|:.|.|...||  |..|.. |.......|......:|:|::
plant   431 GYLLMALALPGSLYIGSMVVGVCYGVRLAITVPTA--SELFGL-KYYGLIYNILILNMPLGSFLF 492

  Fly   281 ARLTSYLIESYGWRGATLILGGTMLNACV 309
            :.|.:.|:..   ..||...||.  |.||
plant   493 SGLLAGLLYD---AEATPTPGGG--NTCV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 40/181 (22%)
MFS <685..869 CDD:119392
AT4G34950NP_195221.1 MFS_Mch1p_like 15..536 CDD:340912 65/289 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.