DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and Slc16a3

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_110461.1 Gene:Slc16a3 / 80878 RGDID:620603 Length:471 Species:Rattus norvegicus


Alignment Length:779 Identity:148/779 - (18%)
Similarity:248/779 - (31%) Gaps:374/779 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 KMPDGGYGWVVVFASLVVSLIADGLSFSF----GLINVELLEYFGESTSKTAWISSLFFSVPLLM 191
            |.||||:||.|:|...:::    |.|::|    .:...||:..||...|.||||||:..::....
  Rat    14 KAPDGGWGWAVLFGCFIIT----GFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILLAMLYGT 74

  Fly   192 GPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAF 256
            ||:.|..|:::|||.:.::||:.::.|...:|||.||..:.:|.|:|:||||.:.:..:::.:..
  Rat    75 GPLCSMCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQPSLIMLNR 139

  Fly   257 WFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLI 321
            :|:|:|..|.|:.|:|:.:.....:.|...|.:.|||||..|||||.:||.|||.||||      
  Rat   140 YFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALMR------ 198

  Fly   322 EENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRY 386
                                                                    ||       
  Rat   199 --------------------------------------------------------PL------- 200

  Fly   387 RSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDD 451
                                                                             
  Rat   201 ----------------------------------------------------------------- 200

  Fly   452 TLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSS----------DEGYLTQKHAS 506
                 :|.:|                     |.|..|:|..|.|          |.|:|....|:
  Rat   201 -----VAPQA---------------------SGGAEPHGPQRPSPRLLDLSVFRDRGFLIYAVAA 239

  Fly   507 SRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAI 571
            |                    :.|.||....|.::|      |:||                :.:
  Rat   240 S--------------------IMVLGLFVPPVFVVS------YAKD----------------MGV 262

  Fly   572 PEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYR 636
            |:          |:.|.|.:|.|.  :....:|:                               
  Rat   263 PD----------TKAAFLLTILGF--IDIFARPT------------------------------- 284

  Fly   637 GAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTL 701
                                                ..|:..:|.:..:|::| ..||:|     
  Rat   285 ------------------------------------AGFITGLKKVRPYSVYL-FSFAMF----- 307

  Fly   702 FLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINICYSLCML 766
              |..|.                                          ||:             
  Rat   308 --FNGFT------------------------------------------DLT------------- 315

  Fly   767 VCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGM 831
              |::.       ::|.||:|.|:.||.::....:....:|::||....|:.|.|||||::.|.:
  Rat   316 --GSTA-------SDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAV 371

  Fly   832 IAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSYLIE-FC--EKKAPKESDSDVLETKKAQL 892
            :.|||..|.:.:.|..:...|..||..:..|.:...|.. ||  ::|.|:.:..:.:.:::.:|
  Rat   372 LIGPPSGGKLLDATKVYKYVFILAGAEVLTSSLVLLLGNFFCIGKRKRPEVTKPEEVASEEEKL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 63/175 (36%)
MFS <685..869 CDD:119392 37/183 (20%)
Slc16a3NP_110461.1 MFS_MCT3_4 21..410 CDD:340988 138/745 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm12325
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.810

Return to query results.
Submit another query.