DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a12

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_989310.1 Gene:slc16a12 / 394932 XenbaseID:XB-GENE-1012784 Length:473 Species:Xenopus tropicalis


Alignment Length:758 Identity:155/758 - (20%)
Similarity:237/758 - (31%) Gaps:331/758 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KTPKMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLMG 192
            |.|  ||||:||::|.....|::....::....:..||...||.:..::||||.|:.....:|..
 Frog    10 KAP--PDGGWGWMIVIGCFFVTVCTRAVTRCISIFFVEFQSYFAQDYARTAWIHSIVDCSTMLCA 72

  Fly   193 PIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAFW 257
            ||.|.:.:.:.|:...|||||:::.|..||||..|:|.|.:|.|:::|||..:.|..|:..:..:
 Frog    73 PIGSYVSNHFSCQVGIILGGVLASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKY 137

  Fly   258 FDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCGALMRDPDWLIE 322
            |:|::..|.||..||:|||||:.|.:...|||.:.||||.|||||.:.|.||||||||       
 Frog   138 FEKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCGALMR------- 195

  Fly   323 ENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDPLDSALKRYR 387
                             .:.|:|               |||......|  |..::|..|.     
 Frog   196 -----------------PITLKE---------------DSLHYPLKQE--QMENEPTQSG----- 221

  Fly   388 SEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPPSTAVIGSPDDT 452
                        .|||.|                                               
 Frog   222 ------------RLDSSC----------------------------------------------- 227

  Fly   453 LMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHASSRYSLNENIFM 517
                                    ||                     |.|..:..|.        
 Frog   228 ------------------------SP---------------------LCQDCSHKRL-------- 239

  Fly   518 AKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAIPEQEQSVNSEL 582
                                         ||.:|.|...||:|                      
 Frog   240 -----------------------------CYCTKKEYSFLLKP---------------------- 253

  Fly   583 ATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYRGAMLNTHRYRL 647
                                                                             
 Frog   254 ----------------------------------------------------------------- 253

  Fly   648 RASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFALFNLSTLFLFIWFIIPYL 712
                                                        ||.:..:|.|||......|::
 Frog   254 --------------------------------------------KFMVLAVSFLFLAYGCSPPFV 274

  Fly   713 YLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNIN--ICYSLCMLVCGASVFFM 775
            ||..|.........::|.|:|.:||...||.|..|::.|..::..:  .||.:.:.:.|....|:
 Frog   275 YLVPYALNVGVSNQEAAFLMSILGIIDIVGNITFGWVTDTRFLKKHRYCCYLIAVGLDGLCCLFL 339

  Fly   776 PLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGV 840
            |:| |.:..|:...|:||:...:..:..|.:...:|.....:.|.|:|..:..|..:..|||||.
 Frog   340 PIL-TRFQLLVPFSVMFGYFDGAYVALIPVVTGDVVGTSSLSSALGVVFFLHAVPYLVSPPIAGW 403

  Fly   841 IYEYTGRWDDTFYYAGIFIALSGVCSYLIEFCE-----KKAPK 878
            :.:.||.:...|..:|..:..   |:.|:...:     ||.||
 Frog   404 LVDTTGDYTAAFLLSGFSMIF---CAVLLALAKIINRIKKRPK 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 67/171 (39%)
MFS <685..869 CDD:119392 47/185 (25%)
slc16a12NP_989310.1 2A0111 12..444 CDD:331689 154/756 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7419
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm14090
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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