DRSC/TRiP Functional Genomics Resources

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Protein Alignment chk and slc16a3b

DIOPT Version :10

Sequence 1:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_997873.1 Gene:slc16a3b / 327276 ZFINID:ZDB-GENE-030131-5487 Length:508 Species:Danio rerio


Alignment Length:793 Identity:143/793 - (18%)
Similarity:242/793 - (30%) Gaps:374/793 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ESGDSIDSSSTEKKTPKMPDGGYGWVVVFASLVVSLIADGLSFSF----GLINVELLEYFGESTS 175
            ::|||         ..|.||||:||.|:|...:::    |.|::|    .:...||:..||...|
Zfish     7 DTGDS---------GVKAPDGGWGWAVLFGCFIIT----GFSYAFPKAVSVFFKELIREFGVGYS 58

  Fly   176 KTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISG 240
            .||||||:..::....||:.|.||:::|||.:.::||:.::.|..|:||..:|..:.:..|:|:|
Zfish    59 DTAWISSILLAMLYGTGPLCSILVNRFGCRPVMMVGGLFASLGMVLASFATNIIHIYLCTGVITG 123

  Fly   241 LGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTML 305
            |||.:.:..:::.:..:|.:||..|.|:.|:|:.:.....:.|...|...|||||..|||||.:|
Zfish   124 LGLALNFQPSLIMLNRYFSEKRPLANGLAAAGSPVALCCLSPLGQVLQYKYGWRGGFLILGGLLL 188

  Fly   306 NACVCGALMRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTE 370
            |.|.||||||                                                       
Zfish   189 NCCACGALMR------------------------------------------------------- 198

  Fly   371 ANQQIDDPLDSALKRYRSEIFLPTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSG 435
                   ||.:..|             |.|:                   ||.|           
Zfish   199 -------PLLAPKK-------------TSEV-------------------EEKP----------- 213

  Fly   436 AGAYPPSTAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYL 500
                                                                             
Zfish   214 ----------------------------------------------------------------- 213

  Fly   501 TQKHASSRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIR 565
                              |.|.|                                          
Zfish   214 ------------------KETKP------------------------------------------ 218

  Fly   566 PTVIAIPEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHR 630
                                                 ||                          
Zfish   219 -------------------------------------KP-------------------------- 220

  Fly   631 NSIHYRGAMLNTHRYRLRASSCPNIYRNSMTTIAKEEEDTWYDNFVDTMKSIFDFSLFLDMKFAL 695
                                                              .:.||::|.|..|.:
Zfish   221 --------------------------------------------------KLLDFTVFKDRGFLI 235

  Fly   696 FNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLSWMNINIC 760
            :.::...:.:...:|.:::..|.|:...:.::||.|::.:|..........|.:..|.|:.....
Zfish   236 YTIAASIMVLGLFVPPVFVVSYAKELGNEDTKSALLLTILGFIDIFARPTSGIIAGLKWVRPRCV 300

  Fly   761 Y--SLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSFTPSILVSIVDLDDFTCAYGLV 823
            |  |..|:..|.: ..:.....:|..|:|.|:.||.::....:....:|::||..:.|:.|.|||
Zfish   301 YLFSFAMIFNGIA-DILGSFAKDYASLVVFCIFFGISYGMVGALQFEVLMAIVGTEKFSSAIGLV 364

  Fly   824 LLVQGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALS----GVCSYLIEFCEKK-----APKE 879
            |||:.:.::.|||.||.:.:.|..:...|..||..:.||    .:|:.|  |.::|     .|.:
Zfish   365 LLVEAIAVLVGPPGAGRLLDATKNYMYVFMLAGCEVVLSALVLAICNLL--FIKRKPQQPDPPAK 427

  Fly   880 SDSDVLETKKAQL 892
            .:..:.||:..:|
Zfish   428 MEMAITETEMEEL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 65/180 (36%)
MFS <687..869 CDD:475125 46/187 (25%)
slc16a3bNP_997873.1 MFS_MCT3_4 21..411 CDD:340988 127/737 (17%)

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