DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chk and mct-5

DIOPT Version :9

Sequence 1:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_495464.2 Gene:mct-5 / 187995 WormBaseID:WBGene00020168 Length:591 Species:Caenorhabditis elegans


Alignment Length:803 Identity:192/803 - (23%)
Similarity:311/803 - (38%) Gaps:261/803 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 KKTPKMPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWISSLFFSVPLLM 191
            |..|..||||:|||||..|..:.:.|||..:|||::..:|:..|..:.:.|:.|.|:.....|..
 Worm     9 KLVPLPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLGA 73

  Fly   192 GPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAF 256
            ||:.|.:.:|||||..||:|..|:..|..||.|...|...:::.|:|.|:|.|:.|..|:|.:..
 Worm    74 GPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLVYCPAIVIVTM 138

  Fly   257 WFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTMLNACVCG--------AL 313
            :|:.||:.||||..:|.|:|..|:..:.:::|.:||||...::....::...|||        ||
 Worm   139 YFESKRSLATGIAVAGAGVGAVVFGPINTFIISNYGWRYVFVLFLFVIILCAVCGATFVPLQFAL 203

  Fly   314 MRDPDWLIEENRLESRSQSVTTFSNSSVCLEEIKKLLDTGITKEAVLDSLVTKNNTEANQQIDDP 378
            :.|.|...|.|               .|..:|:||:                    :.|      
 Worm   204 VPDDDDDGEYN---------------DVFEDEVKKI--------------------DYN------ 227

  Fly   379 LDSALKRYRSEIFL--PTFLSTQELDSICEVKSLSRRSLRHKEGEEAPSRENLLSMSSGAGAYPP 441
                 ||:..::.|  |..:..:.:...|:::         |..:.|                .|
 Worm   228 -----KRFEEKVSLLSPPQVLERSMSQCCDIQ---------KNNQHA----------------RP 262

  Fly   442 STAVIGSPDDTLMGGIAHEAAEEAKKAYLASIETLSPSEKRSTGRTPNGSLRSSDEGYLTQKHAS 506
            |::| |:.|                      :|.|.        |...|::...:.|||.:|   
 Worm   263 SSSV-GAVD----------------------LEPLL--------RPRCGTIGERNSGYLNRK--- 293

  Fly   507 SRYSLNENIFMAKHTTPSISNLKVNGLRHNSVDILSEDMHCYYSKDETFALLEPSRRIRPTVIAI 571
                   ::|.    |.||||                                            
 Worm   294 -------DVFY----TGSISN-------------------------------------------- 303

  Fly   572 PEQEQSVNSELATRRARLDSITGIRRLSRSKKPSHHRSNLRRNISIRNSNFLKDMRIHRNSIHYR 636
                      :|..||               .|..:||.                    .|:|  
 Worm   304 ----------VAEFRA---------------NPDKYRST--------------------GSLH-- 321

  Fly   637 GAMLNTHRY--------RLRASSCPNIYRNSMTTIAKEEEDTWYD-----NFVDTMKSIFDFSLF 688
             ..||.|.:        |.....|.    .|:..:.:::|..:.|     |...|:.::|.|.|.
 Worm   322 -TALNIHTHHTGTVGDDRESGHGCD----QSLDGMNEKKETDFMDDIEGSNMFKTINNMFSFQLL 381

  Fly   689 LDMKFALFNLSTLFLFIWFIIPYLYLPDYMKQYKYDVSQSAELISDVGIAQTVGMIGLGYLGDLS 753
            ||..|.||.:|.|...:.|..|..:||.::.....|.:.|..::|..|.|.|:|.:..|.:.|..
 Worm   382 LDPAFLLFAISNLLTSVGFNSPLYFLPLHVTNILSDNNVSGNILSVYGTANTIGRLIFGVVADQK 446

  Fly   754 ----------------WMNINICYSLCMLVCGASVFFMPLLITNYMGLMVMCVIFGFTFASSFSF 802
                            ||     |::.:.:||....|. .....|:.|.:..|:||||.||....
 Worm   447 LPLPAGLGDDTARNRLWM-----YNISLTICGIVTAFC-YKFDGYILLDIYAVLFGFTIASYVCL 505

  Fly   803 TPSILVSIVDLDDFTCAYGLVLLVQGVGMIAGPPIAGVIYEYTGRWDDTFYYAGIFIALSGVCSY 867
            |..|||.::.||..|.|:||:||.||||.:.||.::|.:.:.||.:..:|.:.||.:.:||:..:
 Worm   506 TSVILVDLLGLDKLTNAFGLLLLWQGVGTVIGPLVSGYLADLTGNYTLSFVFCGINLMVSGLMLF 570

  Fly   868 LIEFCEKKAPKESDSDVLETKKA 890
            :|.:.::|    .|.||...:::
 Worm   571 VIPYFKRK----DDVDVSNKQRS 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chkNP_001163063.1 MFS 143..>315 CDD:119392 59/179 (33%)
MFS <685..869 CDD:119392 63/199 (32%)
mct-5NP_495464.2 MFS_MCT_SLC16 20..573 CDD:340910 181/770 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

Return to query results.
Submit another query.