DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RABA2b

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_172221.1 Gene:RABA2b / 837253 AraportID:AT1G07410 Length:214 Species:Arabidopsis thaliana


Alignment Length:217 Identity:104/217 - (47%)
Similarity:136/217 - (62%) Gaps:19/217 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||.:|.:||...|......||||||..|.:.::||.:|.|||||||||.
plant     9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :|:||.:|||||.|||||||||:|:||.::..||.:.|.|::||:|||:.||||||:..|.|..|
plant    74 YRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADE 138

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            :|.:.|.:.||.|:||||..|.|:|:||.....|||..|.:... ...||.|            :
plant   139 DGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKAL-AAQEAAG------------N 190

  Fly   198 LPGAGGAAGAANS------GCC 213
            |||.|.|...::|      |||
plant   191 LPGQGTAINISDSSATNRKGCC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 102/215 (47%)
RABA2bNP_172221.1 PLN03110 1..214 CDD:178657 104/217 (48%)

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