DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RABC2A

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_568121.1 Gene:RABC2A / 831810 AraportID:AT5G03530 Length:210 Species:Arabidopsis thaliana


Alignment Length:218 Identity:99/218 - (45%)
Similarity:131/218 - (60%) Gaps:25/218 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQIWDTAGQ 65
            |...||.::|||:|||||.||:.|..   ..|.||  ||||:|..:.:|:.||::||.|||||||
plant    10 YDLSFKILLIGDSGVGKSSLLVSFIS---SSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQ 71

  Fly    66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNKSDLDSRRE 128
            |.||::|.||||||.|.:||||:||||||.:|. .|.::...:| |...|.||:|||.|.:|.|.
plant    72 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRESERG 136

  Fly   129 VKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE---KIQEGVFDINNEANGIKIGQQ 190
            |.:|||.|.|:|...:|:|.||||..|||:.|...|.:|.|   .::||...:  :.|.:|...:
plant   137 VSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEGSSAV--KRNILKQKPE 199

  Fly   191 HSPTNPSLPGAGGAAGAANSGCC 213
            |. ||            ..||||
plant   200 HQ-TN------------TQSGCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 97/216 (45%)
RABC2ANP_568121.1 PLN03118 1..210 CDD:215587 99/218 (45%)

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