DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab10

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_057885.1 Gene:Rab10 / 19325 MGIID:105066 Length:200 Species:Mus musculus


Alignment Length:212 Identity:94/212 - (44%)
Similarity:134/212 - (63%) Gaps:16/212 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
            :|..|||.::|||:||||:|:|.:|:|..|......|||::|..:.:.:.||:||||||||||||
Mouse     5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69

  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131
            .|.:||.||||||.|.:||||||..::|.:::.||.:..:|:|.::..||:|||.|:|.:|.|.|
Mouse    70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPK 134

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNP 196
            .:||..|||||:.|.||||:...|:|:||:..|::|..|..  |.:.|:|             |.
Mouse   135 GKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP--VKEPNSE-------------NV 184

  Fly   197 SLPGAGGAAGAANSGCC 213
            .:...||..| ..|.||
Mouse   185 DISSGGGVTG-WKSKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 92/210 (44%)
Rab10NP_057885.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 82/165 (50%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 12/16 (75%)

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