DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-14

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_510572.1 Gene:rab-14 / 181649 WormBaseID:WBGene00004276 Length:210 Species:Caenorhabditis elegans


Alignment Length:211 Identity:121/211 - (57%)
Similarity:157/211 - (74%) Gaps:7/211 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
            :|:|:||||||||.||||||||.|||:|:|......|||||||.|:|.:.|::||||||||||||
 Worm     7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71

  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131
            .||::||||||||||||:|||||||.|:|||::||.||:..:|.|..|.|||||:||:.:|:|..
 Worm    72 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPY 136

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNP 196
            ||.:|||.|:||.|:|.||:|.:|||:||:.|||:||:.||:|..|:|....|::..|       
 Worm   137 EEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAADTGVQPKQ------- 194

  Fly   197 SLPGAGGAAGAANSGC 212
            :||.|....|..:..|
 Worm   195 NLPRAAENNGKKDCNC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 121/211 (57%)
rab-14NP_510572.1 Rab14 10..175 CDD:133322 108/164 (66%)

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