DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-11.1

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_490675.1 Gene:rab-11.1 / 171601 WormBaseID:WBGene00004274 Length:211 Species:Caenorhabditis elegans


Alignment Length:220 Identity:97/220 - (44%)
Similarity:129/220 - (58%) Gaps:27/220 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||.||.:||...|......||||||..|.|:::||.:|.|||||||||.
 Worm     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :|:||.:|||||.||||||||.:..|:.::..||::.|.|::.|:||||:||||||...|.|..:
 Worm    73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            |.:.:|..:.|.|:||||..:.|||.||.|...|||:                .:..:|..|:..
 Worm   138 EAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYK----------------SVSNKHVGTDRQ 186

  Fly   198 LPGAGGAAGA---------ANSGCC 213
              |.||.:|.         ....||
 Worm   187 --GYGGGSGTIIPSPASDPPKKQCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 95/218 (44%)
rab-11.1NP_490675.1 Rab11_like 9..173 CDD:206660 86/163 (53%)

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