DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab2 and zgc:171927

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001096112.1 Gene:zgc:171927 / 100124616 ZFINID:ZDB-GENE-070822-21 Length:210 Species:Danio rerio


Alignment Length:211 Identity:98/211 - (46%)
Similarity:138/211 - (65%) Gaps:5/211 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||||||:|.|..:...:..||||:|..|.|.::||.:|||||||||||.
Zfish     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTAGQER 69

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||.||||||.|.::|||:|.:|:||::..|||:..:::..|:..:|:||||||.|::.|...
Zfish    70 FRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDLSSKKVVDFT 134

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            ....|.....:..:||||:.|.|||:||:..|.||.::|  |...:.||.  :|||.:.: :.|.
Zfish   135 TAMEFTESLKIPLLETSAKNANNVEKAFLAMASEIQKRI--GADSVQNET--VKIGSKIN-SAPL 194

  Fly   198 LPGAGGAAGAANSGCC 213
            .|||..:.....|.||
Zfish   195 WPGAEKSVAEEVSSCC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 96/209 (46%)
zgc:171927NP_001096112.1 Rab1_Ypt1 7..172 CDD:206661 83/164 (51%)

Return to query results.
Submit another query.