DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tomboy40 and TOM40

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_013930.1 Gene:TOM40 / 855243 SGDID:S000004816 Length:387 Species:Saccharomyces cerevisiae


Alignment Length:325 Identity:92/325 - (28%)
Similarity:151/325 - (46%) Gaps:46/325 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LKAEAKKPELTNPGTLEELHSR-CRDIQANT--FEGAKIMVNKGLSNH--FQVTHTINMNSAGPS 103
            |.:..:..||.||||:|.|:.. .||:..:.  |.|.:..:||..|.:  ||.:||.::.|....
Yeast    48 LHSHRQSLELVNPGTVENLNKEVSRDVFLSQYFFTGLRADLNKAFSMNPAFQTSHTFSIGSQALP 112

  Fly   104 GYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTG 168
            .|.|.|.:.....:..        |.||...:::..:.:....:...|...|..|.:....||..
Yeast   113 KYAFSALFANDNLFAQ--------GNIDNDLSVSGRLNYGWDKKNISKVNLQISDGQPTMCQLEQ 169

  Fly   169 DYRGRDYTLTLTMGNPGF-----FTSSGVFVCQYLQSVTKRLALGSEFAY-HYGPNVPGRQVAVL 227
            ||:..|:::.:...||.|     ||  ||.|..:|||||.:||||.|..| ....:.||.  |.:
Yeast   170 DYQASDFSVNVKTLNPSFSEKGEFT--GVAVASFLQSVTPQLALGLETLYSRTDGSAPGD--AGV 230

  Fly   228 SAVGRYAF--GDTVWSCTLGPAGFHL-SYYQKASDQLQIGVE--------------VETNIRQQ- 274
            |.:.||..  .|.::|..|...|..: |.::|.:..::.|:|              :.|.|..| 
Yeast   231 SYLTRYVSKKQDWIFSGQLQANGALIASLWRKVAQNVEAGIETTLQAGMVPITDPLMGTPIGIQP 295

  Fly   275 --ESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGL 337
              |.:.|:..:.:..::  |:||:||||..::..||:::.| ..|:...|.::|.||..::||||
Yeast   296 TVEGSTTIGAKYEYRQS--VYRGTLDSNGKVACFLERKVLP-TLSVLFCGEIDHFKNDTKIGCGL 357

  Fly   338  337
            Yeast   358  357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 90/316 (28%)
TOM40NP_013930.1 Porin3_Tom40 57..360 CDD:132766 90/316 (28%)

Return to query results.
Submit another query.