DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and AT1G50400

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_175457.1 Gene:AT1G50400 / 841462 AraportID:AT1G50400 Length:310 Species:Arabidopsis thaliana


Alignment Length:344 Identity:99/344 - (28%)
Similarity:144/344 - (41%) Gaps:75/344 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSAGLRLPEAPQYSGGVPPQMVEALKAEAK---KPELTNPGTLEELHSRCRDIQANTFEGAKIMV 81
            :.|..:|.|...||....|.:.|.|..||.   ||||                    |||.::..
plant    13 VDAKTKLDEKVDYSNLPCPVLYEELNREATMALKPEL--------------------FEGFRLDY 57

  Fly    82 NKGLSNHFQVTHTINMNSAGP-----------------SGYRFGATYVGTKQYGPTEAFPVLLGE 129
            ||.|:..|.::|:|.|   ||                 :.|.|||.::..|.|        |:|.
plant    58 NKSLNQKFFLSHSILM---GPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLY--------LIGR 111

  Fly   130 IDPMGNLNANVIHQLTSRLRCKFASQFQD--SKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGV 192
            |...|.|||.....||.....|..:...|  .|..| .|..||:|.||...|.:||      :.|
plant   112 ITTDGRLNARAKFDLTDNFSVKANALLTDEEDKSQG-HLVIDYKGSDYRTQLQLGN------NSV 169

  Fly   193 FVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVG---RYAFGDTVWSCTLGPAGFH-LSY 253
            :...|:|.||..|:||.| |:..|..       ::|.||   ||....||.|..:...|.. ::|
plant   170 YAANYIQHVTPHLSLGGE-AFWLGQQ-------LMSGVGYAARYETDKTVASGQIASTGVAVMNY 226

  Fly   254 YQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSL 318
            ..|.|::|....:...|...::.||:|.|  ||.......||.:|||.:::..||::| |:....
plant   227 VHKVSEKLSFATDFIYNYLSRDVTASVGY--DLITRQSRLRGKVDSNGVVAAYLEEQL-PIGLRF 288

  Fly   319 AISGRMNHQKNSFRLGCGL 337
            .:|..::|.|..::.|.|:
plant   289 LLSAEVDHVKKDYKFGFGV 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 86/308 (28%)
AT1G50400NP_175457.1 Porin3_Tom40 28..308 CDD:132766 94/329 (29%)

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