DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and Tomm40l

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001032247.1 Gene:Tomm40l / 641376 MGIID:3589112 Length:308 Species:Mus musculus


Alignment Length:306 Identity:132/306 - (43%)
Similarity:189/306 - (61%) Gaps:3/306 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GVPPQMVEALKAEAKKPELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNS 99
            |:.|......::..::..|.|||:.:|||..|:|:.....||.|::|||.||:||||.||::|::
Mouse     6 GLAPMGTLPRRSHRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHTVHMSA 70

  Fly   100 AGPSGYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGT 164
            .|..||.....|.|..|..|||.||.::|::|..|:|||.|:..|..|||.|...|.|.:|.:..
Mouse    71 LGLPGYHLHTAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTW 135

  Fly   165 QLTGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSA 229
            |..|:|||.|||.|||:|||.....|.:.|..:|||:|.||.||.|..||   ..||.:.|:|:.
Mouse   136 QFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFLQSITHRLVLGGELVYH---RRPGEEGAILTL 197

  Fly   230 VGRYAFGDTVWSCTLGPAGFHLSYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFR 294
            .|:|:....|.:..:|..|.|.|||.||::|:|:|||.|.|.|.|::|.:..|.:.||:||:|||
Mouse   198 AGKYSAVHWVATLNVGSGGAHASYYHKANEQVQVGVEFEANTRLQDTTFSFGYHLTLPQADMVFR 262

  Fly   295 GSLDSNWLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGLMIG 340
            |.:||||.:..||||:::|||.:||:...:||.:|.|..|..:.:|
Mouse   263 GLVDSNWCVGAVLEKKMRPLPVTLALGAFLNHWRNRFHCGFSITVG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 129/286 (45%)
Tomm40lNP_001032247.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 5/22 (23%)
Porin3_Tom40 24..308 CDD:132766 129/286 (45%)
Required for mitochondrial targeting. /evidence=ECO:0000250 281..308 10/26 (38%)

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