DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and tomm40l

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_998124.1 Gene:tomm40l / 405895 ZFINID:ZDB-GENE-040426-2319 Length:338 Species:Danio rerio


Alignment Length:348 Identity:164/348 - (47%)
Similarity:226/348 - (64%) Gaps:18/348 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQMVEALKAEAK--------KPELTNPG 57
            ||:|:|::|.:....|.|  :.|| :...|.::  :||  |..:.|.:.        :|.|.|||
Zfish     1 MGSVLAASAPSPPPPGPG--APGL-VSVPPGFT--MPP--VSPVSAPSSSPTGQQDTEPPLPNPG 58

  Fly    58 TLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEA 122
            ..||.|.:|:::.....||.::.|||||||||||.||:.:::...|.||||||||||||.||.||
Zfish    59 GFEECHRKCKEVFPVQMEGVRLTVNKGLSNHFQVNHTVLLSTQADSSYRFGATYVGTKQTGPGEA 123

  Fly   123 FPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFF 187
            |||::|::|..|:|||.||||:|.::|.||..|.|..|.|..|...:::|.|:|..:|.|||...
Zfish   124 FPVMVGDMDNTGSLNAQVIHQITDKVRSKFVFQTQQQKFVNWQGDTEFKGEDFTAAVTFGNPDVL 188

  Fly   188 TSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLS 252
            ..||:.|..||||||..||||.|..||   ..||.:..|:|..|||...:.:.:.|||.||.|.|
Zfish   189 MGSGIVVAHYLQSVTSSLALGGELVYH---RRPGEEGTVMSLAGRYTGSNFIATLTLGGAGVHAS 250

  Fly   253 YYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFS 317
            ||.||:||||:|||.|.:.|.|:::.|..||:|:|||:|||:|||||||::...|||:|||||.|
Zfish   251 YYHKANDQLQVGVEYEVSTRMQDTSVTFGYQLDVPKANLVFKGSLDSNWVVGANLEKKLQPLPLS 315

  Fly   318 LAISGRMNHQKNSFRLGCGLMIG 340
            ||:|..::|:|:.|:.|.|:.||
Zfish   316 LALSAYLDHRKHKFQCGFGITIG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 147/286 (51%)
tomm40lNP_998124.1 Porin3_Tom40 54..338 CDD:132766 147/286 (51%)

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