DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and LOC1278084

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_317621.3 Gene:LOC1278084 / 1278084 VectorBaseID:AGAMI1_011351 Length:334 Species:Anopheles gambiae


Alignment Length:353 Identity:209/353 - (59%)
Similarity:253/353 - (71%) Gaps:32/353 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQM-VEALKA-------EAKKPE----- 52
            ||||:||:...          ||         .||:||.| .|||.|       ...||.     
Mosquito     1 MGNVLASSKPI----------AG---------PGGLPPPMPTEALPAVGADGAGSPDKPSGESKP 46

  Fly    53 LTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSAGPSGYRFGATYVGTKQY 117
            |.||||:||||.:|:|:....|||||:|:||||||||||:||||:||:..|||||||.||||||.
Mosquito    47 LENPGTMEELHRKCKDVMPVNFEGAKLMINKGLSNHFQVSHTINLNSSNTSGYRFGAMYVGTKQL 111

  Fly   118 GPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRCKFASQFQDSKLVGTQLTGDYRGRDYTLTLTMG 182
            .|||||||:||:|||.||||||:|||:|.::|||||||.|.||:...|||.||:|.:||.:||:|
Mosquito   112 SPTEAFPVVLGDIDPSGNLNANIIHQVTPKVRCKFASQIQSSKVTAAQLTTDYKGPNYTTSLTIG 176

  Fly   183 NPGFFTSSGVFVCQYLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPA 247
            ||....:|||.|..|||:||.:||:|.||||.|||.|||.|:|::||..|||.....||.|:|.|
Mosquito   177 NPNIINNSGVVVAHYLQAVTNKLAMGGEFAYQYGPAVPGGQIALMSAAARYATDLYTWSGTVGAA 241

  Fly   248 GFHLSYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQ 312
            |.||.|||:||:|||||.||||:.|.|||.||:.||:||||:||||||.|||||.:..||||:||
Mosquito   242 GVHLCYYQRASEQLQIGAEVETSFRMQESVATIGYQVDLPKSDLVFRGMLDSNWTVGAVLEKKLQ 306

  Fly   313 PLPFSLAISGRMNHQKNSFRLGCGLMIG 340
            ||||:.|:||.:||.||.|||||||::|
Mosquito   307 PLPFTFALSGMLNHTKNQFRLGCGLIVG 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 189/286 (66%)
LOC1278084XP_317621.3 None

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