DRSC/TRiP Functional Genomics Resources

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Protein Alignment tomboy40 and LOC1273376

DIOPT Version :10

Sequence 1:NP_610213.1 Gene:tomboy40 / 35553 FlyBaseID:FBgn0033074 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_312343.5 Gene:LOC1273376 / 1273376 VectorBaseID:AGAMI1_011310 Length:324 Species:Anopheles gambiae


Alignment Length:327 Identity:92/327 - (28%)
Similarity:149/327 - (45%) Gaps:28/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GLRLPEA-PQYSGGVPPQMVEALKAEAKKPELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLS 86
            |..:||. |:|.|..|...  ...:..::|.| |||.:..||.|...::...|||.::.|.||..
Mosquito     9 GTCVPEPDPRYGGRFPWPF--TWTSGVRQPPL-NPGDMANLHERINHLRPVWFEGFQLNVTKGCG 70

  Fly    87 NHFQVTHTINMNSAGPSGYRFGATYVGTKQYGPTEAF---PVLLGEIDPMGNLNAN--VIHQLTS 146
            .:..:..:.|::...|||:|||    |..|...:::.   |::..:::|. .|..|  ::::...
Mosquito    71 VNRTLGASWNLSHVTPSGFRFG----GHFQRRCSDSVLTTPLVAFDVNPT-TLCTNLLLLYRPVR 130

  Fly   147 RLRCKFASQFQ-DSKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQSVTKRLALGSE 210
            .:..:.|.|.: .:|....:::..|.|...|.|:....|.....|......:|.||..||..|.|
Mosquito   131 SVGLELALQLRPGAKPYVDEVSLQYTGASRTSTVRCSTPDTTLDSYRVSLDHLVSVNDRLCFGVE 195

  Fly   211 F---AYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSYYQKASDQLQIGVEVETNIR 272
            .   .|.      |.|...::..|||....:..:.|:.|..|.|||:||.|..||:|..:..|.|
Mosquito   196 LLCECYR------GAQHTNVAFAGRYNRETSTLAATVSPEAFDLSYWQKVSGTLQMGSSMIVNQR 254

  Fly   273 QQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGL 337
            |..:..||.|:::  ..|.|.|||.||:|.:.....::|.|..|:..:|......||:|:  ||.
Mosquito   255 QNRALGTVCYRLE--HEDTVIRGSFDSDWTVGFTYGRKLTPAAFTARLSLLFCVPKNTFQ--CGF 315

  Fly   338 MI 339
            .|
Mosquito   316 RI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tomboy40NP_610213.1 Porin3_Tom40 53..340 CDD:132766 84/296 (28%)
LOC1273376XP_312343.5 None

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