DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptr and Disp2

DIOPT Version :10

Sequence 1:NP_610209.2 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_001101229.2 Gene:Disp2 / 311324 RGDID:1309569 Length:1346 Species:Rattus norvegicus


Alignment Length:1035 Identity:202/1035 - (19%)
Similarity:349/1035 - (33%) Gaps:332/1035 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 CARWENECFEND--------ILNLDALMDDIEAGQL-NLTFPFMFNPVTWDAHLFPVFFGG---- 194
            ||:...:|..:.        :|:.|.|.......|: :|.|..:|.|:...:.|..::..|    
  Rat   350 CAQVPAKCTGSSAVYQLLHFLLDRDFLSPQTADYQVPSLKFALLFLPIIKTSSLLDIYLDGLGDP 414

  Fly   195 TKLTEDNYVISVPAIQ-------LVYFVTADTKRQDAKGAEWEETFLRVVGNAENSGQFKHISVS 252
            .|:: |||. |:..:.       |.|::..||                         .:..:|: 
  Rat   415 IKVS-DNYT-SISGMDLGLKPRLLKYYLAEDT-------------------------MYPLLSL- 451

  Fly   253 YFASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSAIMATL--- 314
                             |:.:|..:..|..||  ||           |:.|:|.:.::|...   
  Rat   452 -----------------VIIFFGMSLYLRSLF--IT-----------FMSLLGVLGSLMVAFFLY 486

  Fly   315 -AAFGLAMYCGIEFIGINLAAPFLMIGIGIDDTFVMLAGWRRTKAKMP---VAERMGLMMSEAAV 375
             .||.:|.     |..:|||:..|:.|:.::.|.:....||.::.::|   :|.|:|..|.....
  Rat   487 HVAFRMAY-----FPFVNLASLLLLSGVCVNYTLIFFDLWRLSRGQVPSGGLAHRVGRTMHHFGY 546

  Fly   376 SITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVC----FTFLWHITFFAACMAISGYRERKNL 436
            .:.::.:|...:|....:|...:||.|..:...||.    .|.||    ..|.:.:   .||...
  Rat   547 LLLVSGLTTSAAFYGSYLSRLPTVRCFALFMGTAVLVHMGLTLLW----LPATVVL---HERYLA 604

  Fly   437 HSIFGCRVQPMSVAIKEKRNFLYKAIMAGGIDANDPDNPIDNKDHMLMAFFK-----DKMAAVIN 496
            |   ||..|...              ..||.|      |:    .:|:|..:     .|:.::::
  Rat   605 H---GCVAQAQG--------------QRGGSD------PL----RLLLALHRRIRILRKIFSILS 642

  Fly   497 NKWCKAII-----------ILAFASYLVGACY--GITQIKEGLERRKLS---------REDSYSV 539
            ....:.::           |..||:...|..|  |::      .|.:|.         ...|:..
  Rat   643 RLLFQRLLPCGVIKFRYIWICWFAALAAGGAYIGGVS------PRLRLPILLPLGGQFFRSSHPF 701

  Fly   540 EFFDREDDYYREFPYRMQ----------------VIIAG--PLNYSDPLVQEQVENLTSTLEHTS 586
            |.||.|        ||.|                |::.|  |::.||||   .....:|.:....
  Rat   702 ERFDAE--------YRQQFLFEDLPPNEGGNLPVVLVWGILPVDTSDPL---DPRTNSSVVSDPD 755

  Fly   587 YVTSRRYTESWLRSFLSFLERNNELLNVTVDDEQT--FIDAVKEHWL------------------ 631
            :..|....:.||::.....: |........:...|  .::|::: |:                  
  Rat   756 FSPSSPEAQEWLQALCQGAQ-NQSFFGDQPEGWPTLCLVEALQQ-WMESPSCGRLGADLCCGQSE 818

  Fly   632 FPGNP-------FSLDVRFNEDETQIIASRF-----LIQAVNITDTN----------HE--KEMV 672
            ||..|       ..:.:..:.|.|:.:..||     |...|....||          |.  .|:.
  Rat   819 FPWAPQLYLHCLKMMALEQSPDGTRDLGLRFDSHGNLAALVLKFQTNLPYSTEYGPVHHFYTEVS 883

  Fly   673 RDLRQICKDSP--LNASIFHPYFVFFDQFELVRPVSLQ-AMVIGAIIMMIISFVFIP--NILCSL 732
            |.|......:|  ||...|..   ..:.:.|...:|.: |:|:|..:.:..:.:.:.  |:..||
  Rat   884 RWLSTEMSKAPPGLNKGWFTS---TLELYSLQHSLSTEPAVVLGLALALAFATLLLGTWNVPLSL 945

  Fly   733 WVAFSVISIELGVAGYMALWDVNLDSISMINLIMCIGFSVDFTAHICYTYMSSKKRSPKARVREA 797
            :...:|....|...|.:.|.:..|::...:.|...:|.|||.|.:.|.:|.........:||..:
  Rat   946 FSVAAVAGTVLLTVGLLVLLEWQLNTAEALFLSASVGLSVDLTVNYCISYHLCPHPDRLSRVAFS 1010

  Fly   798 LHSLGLPIIQGSSSTILGIVALLLAQSYI-----FLVFFKM---VFLVIFFGAMHGLFLLPVLLS 854
            |.       |.|.:|.:| ..:|.|...|     .|::.|:   |.:|.|.|.....|....|..
  Rat  1011 LR-------QTSRATAMG-TGVLFASGVIMLPSTILLYRKLGIIVMMVKFLGCGFASFFFQSLCC 1067

  Fly   855 LFGP-GSC---------LTWTGKDDGSDAEVDDGLDDRQLEKP--FSQSYYMQYPSIGINGPYGS 907
            .||| .:|         |.|       ||..:|. |::....|  ||:.|.:|            
  Rat  1068 FFGPEKNCGQILWPCAHLPW-------DAGTEDP-DEKGRTGPPGFSEHYELQ------------ 1112

  Fly   908 KGFLGAPYKAYGVDEKDLGLGTSGEDSSESSSSRSQHRQQAAATE----------EEVVVRESPT 962
                            .|....|....:.:::|:..||....:.:          :...|..||.
  Rat  1113 ----------------PLARRRSPSFDTSTATSKLSHRPSILSEDLQIHDGSCCLQHAQVPVSPR 1161

  Fly   963 RRYDDGWRRSSYQNIYGQGAAQFQAQPDLYGKQVSATEWRQRLDTHEQQQRQRQRRSPFE 1022
            ....|      :|.::.|..|...:.|  | |||....     .|..:|..|.|:..|.:
  Rat  1162 DLLLD------HQTVFSQCPALQTSSP--Y-KQVGPNP-----QTWIRQDSQGQKTEPLQ 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtrNP_610209.2 Patched 53..845 CDD:308203 163/834 (20%)
Disp2NP_001101229.2 MMPL <448..604 CDD:440656 43/198 (22%)

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