DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment EcR and nhr-76

DIOPT Version :10

Sequence 1:	NP_724460.1	Gene:	EcR / 35540	FlyBaseID:	FBgn0000546	Length:	878	Species:	Drosophila melanogaster
Sequence 2:	NP_499961.2	Gene:	nhr-76 / 182276	WormBaseID:	WBGene00015497	Length:	480	Species:	Caenorhabditis elegans

Alignment Length:	11	Identity:	2/11 - (18%)
Similarity:	7/11 - (63%)	Gaps:	0/11 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    35 PVPVQYRVNYV 45
            ||.:..::.::
Worm    30 PVSIHMKLAFL 40

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_724460.1	NR_DBD_EcR	261..351	CDD:143535
EcR	NP_724460.1	NR_LBD_EcR	420..652	CDD:132736
nhr-76	NP_499961.2	ZnF_C4	78..151	CDD:197701
nhr-76	NP_499961.2	HOLI	266..428	CDD:214658
Blue background indicates that the domain is not in the aligned region.

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