DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actr2

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001025569.1 Gene:actr2 / 594957 XenbaseID:XB-GENE-488998 Length:394 Species:Xenopus tropicalis


Alignment Length:380 Identity:178/380 - (46%)
Similarity:251/380 - (66%) Gaps:15/380 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
            :|.|||:|..|.|:||.:.|..:||::||||  |....:..:..||..|||||...|.:|.:.||
 Frog     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPVIRSTAKVGNIEIKDLMVGDEASELRSMLEVNYP 73

  Fly    72 IEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
            :|:|||.|||||:.:|.:||..| |.:...:..:||||.|:||..||||:.::||||:....:||
 Frog    74 MENGIVRNWDDMKHLWDYTFGPEKLNIDTRDCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYV 138

  Fly   136 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
            ||||||:|||.|..||:|:||||||:|..|:|||::|||...|||:||||:|.||:|:|..|||:
 Frog   139 AIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYA 203

  Fly   201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQP 265
            |..:|:.|.||.||||||||..:.|||...|..::.|.:||.||||:||.:|.|||..||:||||
 Frog   204 FNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQP 268

  Fly   266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------- 321
            ..:.:|..|:.|..:|:|...|:|.|.:.|.:.|||||:|||||:..|:::|:..|         
 Frog   269 HLINVEGVGVAELLFNTIQAADIDTRPEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGD 333

  Fly   322 --APSTMKIKIVAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 373
              ..|..||:|..||.||:.|::||::||. :......|:::|||.|.|..::.:
 Frog   334 VEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGTRVLEK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 178/376 (47%)
actr2NP_001025569.1 ASKHA_NBD_Arp2 7..388 CDD:466821 178/378 (47%)

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