DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or85b

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524279.2 Gene:Or85b / 41007 FlyBaseID:FBgn0037590 Length:390 Species:Drosophila melanogaster


Alignment Length:418 Identity:79/418 - (18%)
Similarity:158/418 - (37%) Gaps:86/418 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RAMKFIGWLPPKQGVLRYV-----YLTWTLMTFVWCTTYLPLGFLGSY--MTQIKSFSPGEFLTS 83
            :.||:..:.....|:..|.     .:...:...|:.:..:.|.|:|.:  :....:|...:||.:
  Fly     3 KLMKYASFFYTAVGIRPYTNGEESKMNKLIFHIVFWSNVINLSFVGLFESIYVYSAFMDNKFLEA 67

  Fly    84 LQVCINAYGSSVKVAIT--YSMLWRLIKAKNILDQLD-------LRCTAMEEREKIHLVVARSNH 139
              |...:|...|.|.::  :.:.|:......::::|.       :|    |||..:.:.:...:.
  Fly    68 --VTALSYIGFVTVGMSKMFFIRWKKTAITELINELKEIYPNGLIR----EERYNLPMYLGTCSR 126

  Fly   140 AFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLW----------VASTLEYMVM 194
            ..||::.:|          |||.    | .:|.|.     .::.|          |...|.|::.
  Fly   127 ISLIYSLLY----------SVLI----W-TFNLFC-----VMEYWVYDKWLNIRVVGKQLPYLMY 171

  Fly   195 SGAVLQDQLSDSYPLIYT----------------LILRA-------HLDMLRERIRRLRSDENLS 236
            .....||..| .|||:::                ::|.|       |.|.|...:.|.....:..
  Fly   172 IPWKWQDNWS-YYPLLFSQNFAGYTSAAGQISTDVLLCAVATQLVMHFDFLSNSMERHELSGDWK 235

  Fly   237 EAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVL---GFTLINVFFFSDIWTGIA 298
            :...:  ||..|..|:.|||....:..:....:...|::...|:   ||.: .|....||  .:.
  Fly   236 KDSRF--LVDIVRYHERILRLSDAVNDIFGIPLLLNFMVSSFVICFVGFQM-TVGVPPDI--VVK 295

  Fly   299 SFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAG 363
            .|:|:::.:.|.:..|:...|:.:.....:.|.:...|..|..|||..|:..:.. .|.:.|:..
  Fly   296 LFLFLVSSMSQVYLICHYGQLVADASYGFSVATYNQKWYKADVRYKRALVIIIAR-SQKVTFLKA 359

  Fly   364 GIF-QISMSSNISVAKFAFSVITITKQM 390
            .|| .|:.|:...:.:.::....:.:.|
  Fly   360 TIFLDITRSTMTDLLQISYKFFALLRTM 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 69/350 (20%)
Or85bNP_524279.2 7tm_6 64..378 CDD:251636 69/346 (20%)

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