DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or63a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523895.2 Gene:Or63a / 38354 FlyBaseID:FBgn0035382 Length:420 Species:Drosophila melanogaster


Alignment Length:154 Identity:30/154 - (19%)
Similarity:61/154 - (39%) Gaps:5/154 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 EELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLI----GLVLGFTLINVFFFSDIWTGIASFMF 302
            |.|..|:..::.:..:...:....:...||||||.    ||.|....:.:...|.| |.|...|:
  Fly   266 EYLRCCIYQYQRVANFATEVNNCFRHITFTQFLLSLFNWGLALFQMSVGLGNNSSI-TMIRMTMY 329

  Fly   303 VITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQ 367
            ::....|...:||.........|.:.:|.:|..|...||.::..:...|....:..........|
  Fly   330 LVAAGYQIVVYCYNGQRFATASEEIANAFYQVRWYGESREFRHLIRMMLMRTNRGFRLDVSWFMQ 394

  Fly   368 ISMSSNISVAKFAFSVITITKQMN 391
            :|:.:.:::.:.:.....:.:.:|
  Fly   395 MSLPTLMAMVRTSGQYFLLLQNVN 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 29/142 (20%)
Or63aNP_523895.2 7tm_6 76..408 CDD:251636 29/142 (20%)

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