DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or59c

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster


Alignment Length:287 Identity:55/287 - (19%)
Similarity:99/287 - (34%) Gaps:85/287 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1301 TIEHSELNNARSIQVAVIRTETNTTLYVNEKNVTVER---------------GFLLLDEYSNKPW 1350
            ||.:..||..|    |.:..:|..|.::..:.:.::.               ..:|:|.:.:.  
  Fly    57 TIVYPVLNVTR----AELPLKTEVTFFLKRQGIALDEMICRDDIDWPTEQALNVVLVDHHVSS-- 115

  Fly  1351 TNPELEVLSPHRPPAPPTEYFQFNIGGYDPANLLRPNQ-DTTELEGYIGCIRGLKIGENLISLRE 1414
            .|..:..:..|||              .:.|....||. .|.||.|....:.|.::..:.||..|
  Fly   116 LNQNIVGIVDHRP--------------VEAAARFNPNAFKTIELVGSCATLVGRQLFSDGISPEE 166

  Fly  1415 MATQNNAHVTDGVLNGCQMKCDAEPCKNGGICTENFVRQESTCNCEHTSFLGEFCSEEKGASFSG 1479
            ....|   |..|:|....:           :.|.||.::               ..:.|...:..
  Fly   167 REGYN---VALGLLYAAIV-----------LDTVNFSKE---------------ADKAKPLDYDM 202

  Fly  1480 EATLLRRLALADTVGSVRLQLAFSS-----NDMRRANRVMLLLQ-----SRNDRSYYLMVAI--- 1531
            ...:..:|.:.:.|.|:..:..|.|     :|:...|...|||:     |:|||:    ||:   
  Fly   203 AERIESQLQITEQVRSLHREQLFKSLVDARSDVSELNAYQLLLKDLKIISQNDRT----VAVPGF 263

  Fly  1532 --TAENHLYIEEDREGAT-YAARIEGN 1555
              ..:.::.:.|.||... :|...|.|
  Fly   264 PMAVQEYIKLPEWREHLNRFATSTESN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 47/261 (18%)
Blue background indicates that the domain is not in the aligned region.

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