DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or59b

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523822.1 Gene:Or59b / 37715 FlyBaseID:FBgn0034865 Length:398 Species:Drosophila melanogaster


Alignment Length:141 Identity:30/141 - (21%)
Similarity:38/141 - (26%) Gaps:43/141 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 FKSSSNNNTVDSLGEVKRGTC-----------PCAIGKNCEDLNHSCN----------------- 943
            ||..:|.:.....|.|....|           .|.  :.|..||..|.                 
  Fly   197 FKRQNNRSNNSDKGNVSLRFCRDLQTLAIVQWQCF--RACNRLNDECGLSNVSIFGMFFYVLTAK 259

  Fly   944 -------CDANLNRWLSDEGYYKEPPNLGITQ-MYFLQQKNLDEESQGRVTLGPLECVETNTQKY 1000
                   |.....|......:..||..|.|.. :||.....|     |.:.|...:.|..|..|:
  Fly   260 SFQLFYICSIEFKRHGFTFTHLLEPTVLIIAVFLYFFTSAYL-----GEMVLRETQLVINNLHKF 319

  Fly  1001 VVTFTTSQSYI 1011
            ....||||..|
  Fly   320 ESMHTTSQHKI 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636
Or59bNP_523822.1 7tm_6 77..382 CDD:251636 30/141 (21%)
Blue background indicates that the domain is not in the aligned region.

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