DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or43a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:411 Identity:75/411 - (18%)
Similarity:149/411 - (36%) Gaps:122/411 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KFIGWLP-PKQGVLRYVYL--------TWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSL 84
            ||...|| ....::::|||        .:.|..|.:...:..|  :.:::..||.....|||..|
  Fly    32 KFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFSAIFNAL--MRTWLVIIKRRQFEEFLGQL 94

  Fly    85 QVCINAYGSSVKVAITYSMLWRLIKAKNILDQLD------LRCTAMEEREKIHLVVARSNHAFL- 142
            ....:                      :|||..|      ||   ..|||..:|.:...:.:|| 
  Fly    95 ATLFH----------------------SILDSTDEWGRGILR---RAEREARNLAILNLSASFLD 134

  Fly   143 -------------------------------IFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDW 176
                                           ::..:|.....:..|.|:        :|.||:..
  Fly   135 IVGALVSPLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSM--------MYMPFVSL 191

  Fly   177 HDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESY 241
            ..|            :.:.|                   :|.|.:|..|:.::..:|. ||.|.:
  Fly   192 FAG------------LAIFG-------------------KAMLQILVHRLGQIGGEEQ-SEEERF 224

  Fly   242 EELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTG----IASFMF 302
            :.|..|:..|..::||...:..::...:..:.::.|.:    :.::.|..:|.|.    |:..|:
  Fly   225 QRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSI----ICSLLFCLNIITSPTQVISIVMY 285

  Fly   303 VITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQ 367
            ::|:|...|.:....|.|..:...:..|::...|.:|..|::.|||.||...|.|:....|.::.
  Fly   286 ILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYP 350

  Fly   368 ISMSSNISVAKFAFSVITITK 388
            ::::...|:...::|..|:.:
  Fly   351 MTLAMFQSLLNASYSYFTMLR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 61/346 (18%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 66/378 (17%)

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