DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and LOC1280680

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_320541.1 Gene:LOC1280680 / 1280680 VectorBaseID:AGAMI1_012949 Length:419 Species:Anopheles gambiae


Alignment Length:402 Identity:76/402 - (18%)
Similarity:151/402 - (37%) Gaps:102/402 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCI--NAYGSSVKVAITYSM 103
            :.|.|..:.|:.|....|     ...|.:..:..|:.|    :|::|:  ..||       |.:.
Mosquito    64 ISYFYKAYRLILFPEDNT-----SAASVIASVWGFTEG----TLRICLIELRYG-------TLAS 112

  Fly   104 LWRLIKAKNILDQLDL----RCTAMEEREKIHLVVARSNHAFLIFTFVYCGYAGSTYLSSVLSGR 164
            :...:..::...|..|    |.|...|..:|.|::.    |.::...::       ::::.|..|
Mosquito   113 IMSFLNERSYRQQDSLVRQQRATLFGENNRIQLILV----ATMLMEAIW-------FMTTQLFSR 166

  Fly   165 PPWQLYNPFIDWHDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTL-------ILRA-HLDM 221
            ..:.|.   ::.|       |..::...::.|.     ||:.:.|||.|       |:.. ||:|
Mosquito   167 DAFMLQ---VNGH-------VVDSIAVQILYGL-----LSNVWGLIYVLSFAIFYIIMNTLHLEM 216

  Fly   222 -----------------LRERIRRLRSDENLSEAESYE----ELVKCVMDHKLIL----RYCAII 261
                             |::|:..|.:..:.|....:.    ||...:..|..:|    .:.:|:
Mosquito   217 SILLDGITSVQFTVMRRLKQRMETLAASGHSSTQVFWSILQPELNSHISRHVDLLDNLKEFSSIV 281

  Fly   262 KPVIQGTIFTQFLLI---GLVLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMED 323
            .|......:....||   |.:|....::.       .|:...:||..::.|:|..|.....:.:.
Mosquito   282 GPFSFVQYYGTLALIADCGFILSIEGLSA-------NGMIYLLFVTVLVFQSFILCRGIEKLNDL 339

  Fly   324 CESLTHAIFQS-NWVDA-------SRRYKT---TLLYFLQNVQQPIVFIAGGIFQISMSSNISVA 377
            .|::..|::.. :|.|.       .|:|.|   ||:..:...|:......||:..|||.....:.
Mosquito   340 NEAIGQALYSGFDWPDMLQYDQRFRRQYVTVRHTLMLVIGRSQKGFQCSYGGLGSISMERFAQLM 404

  Fly   378 KFAFSVITITKQ 389
            :.::|::||..|
Mosquito   405 QKSYSLLTILLQ 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 65/357 (18%)
LOC1280680XP_320541.1 7tm_6 <231..408 CDD:251636 35/183 (19%)

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