DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and LOC1272907

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_061504134.1 Gene:LOC1272907 / 1272907 VectorBaseID:AGAMI1_000973 Length:367 Species:Anopheles gambiae


Alignment Length:405 Identity:83/405 - (20%)
Similarity:168/405 - (41%) Gaps:91/405 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YLYRAMKFIGW--LPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQ 85
            :|.|.:|::|:  :.|...|......|..:......|:||   :|.:::.....|:.        
Mosquito    11 FLRRPLKWLGFDVIDPNWKVTPLTMFTIVMFALQHYTSYL---YLSTHLDMFDMFTE-------- 64

  Fly    86 VCINAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAME---EREKI--------------HLV 133
             |.:....::::||...:|         :.|.:||...:|   ::.|:              |.:
Mosquito    65 -CFSTSAVALEIAIRMGLL---------VHQRELRNETIEIIRQQHKMFGNSAAIRKVTARFHKL 119

  Fly   134 VARSNHAFLIFTFVYCGYAGSTYLSS-------VLSGRP-----PWQLYNPFID------WHDGT 180
            ::.:.||.           .:.|:|:       ::|..|     |..:|.|::.      ||   
Mosquito   120 ISVTLHAL-----------AACYMSTMMFELIPIVSPNPRKSNLPLPMYLPYMPHDVTPYWH--- 170

  Fly   181 LKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAH-LDMLRERIRRLRSDENLSEAESYEEL 244
            |.....:.:..|.:...|..|.|     |:.:::...| :.:|:..|:.|  |....:||.:.||
Mosquito   171 LNYTFITVMNLMCILFLVGIDGL-----LVLSILAAVHQIKLLKITIQEL--DIGAEQAELHREL 228

  Fly   245 VKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVL--GFTLINVFFFSDIWTGIASFMFVITIL 307
            |:.:..|:.|.::...::......:...|.|:.|:|  |..:|.....:.||      .|:|.::
Mosquito   229 VRIIQIHQRIQQFIHQLEQTYYIDLLVDFGLVCLILCMGLNVIADEVINAIW------FFLIAVV 287

  Fly   308 LQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQ-ISMS 371
            .|....|::.||::.:.:||:..::..:|.......:..|:..:.:.|:|.|.  .|||. :.||
Mosquito   288 FQLSLLCFSGNLLLIESDSLSSCVYSIDWHAMPVPEQKLLMVMIAHAQKPQVL--RGIFMPLIMS 350

  Fly   372 SNISVAKFAFSVITI 386
            |.:||.|.::|..|:
Mosquito   351 SFLSVIKASYSYFTL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 69/343 (20%)
LOC1272907XP_061504134.1 None

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