DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or65b

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_729162.3 Gene:Or65b / 318012 FlyBaseID:FBgn0041624 Length:406 Species:Drosophila melanogaster


Alignment Length:410 Identity:82/410 - (20%)
Similarity:157/410 - (38%) Gaps:119/410 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LYTQSKDS--PVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLWSFALNFCSTFYQPIGFLTGYI 72
            |:|.:::.  |.||:..||..::.|.          ||.:   .||.|.      :.:|      
  Fly    41 LFTTTEERLLPYRSKWHTLVYIQMVI----------FFAS---MSFGLT------ESMG------ 80

  Fly    73 SHLS-----EFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITD-----P 127
            .|:.     .|..|.|....:..:..|                     ..||:|:.|:|     |
  Fly    81 DHVQMGRDLAFILGAFFIIFKTYYFCW---------------------YGDELDQVISDLDALHP 124

  Fly   128 GERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLS---AIFIGRP--------PYQNYYPFLDWRS 181
            ..:...:.....:.:.::|.||.::..:.:.||.   .:.|..|        |:...:|| .|..
  Fly   125 WAQKGPNPVEYQTGKRWYFVMAFFLATSWSFFLCILLLLLITSPMWVHQQNLPFHAAFPF-QWHE 188

  Fly   182 STLHLALQAGL----EYFAMAGACFQDVCVDCYPVNFVLVLRA-HMSIFAE----------RLRR 231
            .:||....|.:    .|||:            |.:.::|.:.. .:.|:||          .||:
  Fly   189 KSLHPISHAIIYLFQSYFAV------------YCLTWLLCIEGLSICIYAEITFGIEVLCLELRQ 241

  Fly   232 LGTYPYESQEQKYE--RLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINI-VLF 293
            :..:.|..||.:.|  |||:.   |:.|:..:|....|..||:.:|     :.:.|:|::: ||.
  Fly   242 IHRHNYGLQELRMETNRLVKL---HQKIVEILDRTNDVFHGTLIMQ-----MGVNFSLVSLSVLE 298

  Fly   294 A-------NLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQS-NWIDEEKRYQKTL 350
            |       .:.:..|.|..:|...|....:|  .:.|::...::::|.::: :.....|...:.|
  Fly   299 AVEARKDPKVVAQFAVLMLLALGHLSMWSYC--GDQLSQKSLQISEAAYEAYDPTKGSKDVYRDL 361

  Fly   351 MYFLQKLQQPITFMAMNVFP 370
            ...:::.|.|: .|..:.||
  Fly   362 CVIIRRGQDPL-IMRASPFP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 66/334 (20%)
Or65bNP_729162.3 7tm_6 83..395 CDD:251636 67/343 (20%)

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