DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and Jon66Ci

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster


Alignment Length:94 Identity:21/94 - (22%)
Similarity:38/94 - (40%) Gaps:20/94 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 HID-GYRETFPPLTSYNSDFKSKIHEDP-----SESASTLIRNTHSNHHQQHHHSHYSTLQFDQV 203
            |.| ||  |...|.|     :.|:..:|     |.|:..|:.:|:|..|....::..::....::
  Fly    46 HTDFGY--TIKVLRS-----RKKLELEPQLDLKSLSSVDLLEDTNSKTHTDFSYTIKASRSKKKL 103

  Fly   204 DEEEPEDNI------AYQFSNGFQRIKPK 226
            |.:.....:      |::......| |||
  Fly   104 DTKSKTRTVFDYTIKAFRSKKKLDR-KPK 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830 21/94 (22%)
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 21/94 (22%)
Blue background indicates that the domain is not in the aligned region.

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