DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG13527

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001286744.1 Gene:CG13527 / 37615 FlyBaseID:FBgn0034776 Length:292 Species:Drosophila melanogaster


Alignment Length:221 Identity:53/221 - (23%)
Similarity:92/221 - (41%) Gaps:41/221 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 CGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLPFQLTGVKTV--DVHPDYDPST- 511
            |||.::.:|:|:::|.||.|  .:.|..|| .|.|.....|...:.|..|:|  .|...|.|.. 
  Fly    62 CGGGLLSNQWVITAAHCVMG--QSKIMYKA-RWLLVVAGSPHRLRYTPGKSVCSPVSSLYVPKNF 123

  Fly   512 ---NSHDLAIIRLERRLEFAS-HIQPICISDEDPKDSEQCFTSGWGKQ----ALSIHEEGALMHV 568
               |:.::|:::|:.::.... .|..:.:..|.||...:....|||:.    .|::|     ::.
  Fly   124 TMHNTFNMALMKLQEKMPSNDPRIGFLHLPKEAPKIGIRHTVLGWGRMYFGGPLAVH-----IYQ 183

  Fly   569 TDTLPQARSECSA-----DSSSVCSATK-----FDSCQFDVGSALACGSGSSVRLKGIFAGENSC 623
            .|.:....:.|..     ....:|:...     .:.|..|:||.|..|.    .:.||.|....|
  Fly   184 VDVVLMDNAVCKTYFRHYGDGMMCAGNNNWTIDAEPCSGDIGSPLLSGK----VVVGIVAYPIGC 244

  Fly   624 G-----EGQTVRFAKPDIKWI-NTAF 643
            |     ...|..|:  .::|| :||:
  Fly   245 GCTNIPSVYTDVFS--GLRWIRHTAY 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 42/186 (23%)
CG13527NP_001286744.1 Tryp_SPc 43..266 CDD:238113 51/217 (24%)
Blue background indicates that the domain is not in the aligned region.

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