DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG18636

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_995714.2 Gene:CG18636 / 2768923 FlyBaseID:FBgn0032551 Length:349 Species:Drosophila melanogaster


Alignment Length:253 Identity:60/253 - (23%)
Similarity:105/253 - (41%) Gaps:42/253 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 YVDPWPVNLAGVCATRNK-RTKPTGVKDLDANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSS 463
            ::||       .|..|.: ||....:....|.:...||. :.|..::...:|||::|.|:.||::
  Fly    28 FLDP-------ACGIRTQSRTAYRIINGHTAKYNSSPWM-VFLHSTTDMFVCGGSLITDKLVLTA 84

  Fly   464 ASCVNGLPVTDIRVKAGEWELGSTNEPLPFQLTGV-------KTVDV---HPDYDPSTNSHDLAI 518
            |.|.  :....:..:.||:|...:.|     .||.       ..||.   |..|||:|:::|:||
  Fly    85 AHCF--IANQHLVARLGEYERTRSEE-----CTGYYCNFREEHMVDAGFKHKLYDPNTHANDIAI 142

  Fly   519 IRLERRLEFASHIQPICISDEDP----KDSEQCFT-SGWGKQALSIHEEGALMHVTDTLPQARSE 578
            :||.:.:.:..:|:|||:..:..    .|.....| :||||  ..:..:...:...|...|....
  Fly   143 LRLSKSVVYRDNIRPICVVWDHRWRHYLDKIDLLTATGWGK--TQMESDSDALQTLDIRRQPPDV 205

  Fly   579 CSADSSSVCSATKFDSCQFDVGSALACGSGSSVRLKGIFAGENSCGEGQTVRFAKPDI 636
            |:.......:..:|.:..:|   :..|...|...|..:...:|      |.||.:..|
  Fly   206 CAKFIGQTIAGNQFCAGNWD---SNLCNGDSGGPLGAVITHKN------TQRFVQVGI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747 2/7 (29%)
Tryp_SPc 428..616 CDD:238113 49/202 (24%)
CG18636NP_995714.2 Tryp_SPc 45..278 CDD:238113 54/229 (24%)
Blue background indicates that the domain is not in the aligned region.

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