DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and ppm1ba

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_571473.1 Gene:ppm1ba / 30672 ZFINID:ZDB-GENE-991102-16 Length:390 Species:Danio rerio


Alignment Length:650 Identity:146/650 - (22%)
Similarity:199/650 - (30%) Gaps:307/650 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFD---NNTSFFAVYDGHGGA 62
            |||:|..|||:|.:.......|..|.|||||||...||||.:.:...   ::.|||.|||||.|:
Zfish     1 MGAFLDKPKTEKHNAHGEGNGLRFGLSSMQGWRVEMEDAHTAAVGLPHGLDDWSFFGVYDGHAGS 65

  Fly    63 EVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADD 127
            .||.||:                              |.||             ||......||:
Zfish    66 RVANYCS------------------------------KHLL-------------EHIVAAGSADE 87

  Fly   128 YEEEDLAELQEESNLPLNEVLEKYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATN 192
            ..:..       :..|....:|..|                          ||.||..|..:...
Zfish    88 LRKAG-------APAPETPAIEAVK--------------------------RGIRAGFLRIDEHM 119

  Fly   193 KAVMDPSAKPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAALKD 257
            :                                                  |..||         
Zfish   120 R--------------------------------------------------SFTDL--------- 125

  Fly   258 DSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQDD 322
                     .||.|                                                   
Zfish   126 ---------RNGMD--------------------------------------------------- 130

  Fly   323 EFTDDDADYEENDNVKSPDTSSAESSDCTENDDDGDEDGNEDSDEEETDEDQMANDNFCANMIEE 387
                                                                             
Zfish   131 ----------------------------------------------------------------- 130

  Fly   388 PGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLD 452
               .||.|||..||....||..|.||||.::.|||.....::||||.|..|..||..|||.|.:.
Zfish   131 ---RSGSTAVAVLLSPEHLYFINCGDSRALLCRSGHVCFSTMDHKPCDPREKERIQNAGGSVMIQ 192

  Fly   453 GRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIIT-PEDEFMVLACDGIWNYMSSEE 516
             ||||.|.:||||||:.||........||::|..|::.::..: .||||:||||||||:.|::|:
Zfish   193 -RVNGSLAVSRALGDYDYKCVEGKGPTEQLVSPEPEVFEIARSDAEDEFVVLACDGIWDVMTNED 256

  Fly   517 VVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKKKLQELQSTIP--PNQ 579
            :..|||.||:....|..:|.|:.|..|...:.      |||:.|:|           .:|  |..
Zfish   257 LCAFVRSRLEVTDDLERVCNEVVDTSLHKGSR------DNMSIVLV-----------CLPNAPQV 304

  Fly   580 TEDKLLKTSENVSHSLNDQSASKRCASQNADADDEILEKNNS------KRLKTDLEQENIKDRTP 638
            :||.:.:.:|      .|:....|.        :|::||...      ..:.:.|.||||.:..|
Zfish   305 SEDAVKRDAE------LDKYLESRV--------EELIEKAGEDGVPELAHVMSSLSQENIPNLPP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 26/84 (31%)
PP2Cc <374..564 CDD:238083 75/190 (39%)
ppm1baNP_571473.1 PP2Cc 23..298 CDD:238083 121/555 (22%)
PP2C_C 292..367 CDD:285117 17/88 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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