DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and ptc3

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_593087.1 Gene:ptc3 / 2542008 PomBaseID:SPAC2G11.07c Length:414 Species:Schizosaccharomyces pombe


Alignment Length:684 Identity:166/684 - (24%)
Similarity:218/684 - (31%) Gaps:332/684 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFD-----NNTSFFAVYDGHG 60
            ||..||.|.|:|.|.:..||.:..|.|||||||.|.||||::||:.:     :...|||||||||
pombe     1 MGQTLSEPVTEKHSVNGSNEFVLYGLSSMQGWRISMEDAHSAILSMECSAVKDPVDFFAVYDGHG 65

  Fly    61 GAEVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTLLDPSIVSILKILAGEHNFVDAEA 125
            |.:||::|...||..|:....::.|.|..|||.:||..||.:||                     
pombe    66 GDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILD--------------------- 109

  Fly   126 DDYEEEDLAELQEESNLPLNEVLEKYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEA 190
                                                                             
pombe   110 ----------------------------------------------------------------- 109

  Fly   191 TNKAVMDPSAKPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAAL 255
                                                                             
pombe   110 ----------------------------------------------------------------- 109

  Fly   256 KDDSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQ 320
                                                                             
pombe   110 ----------------------------------------------------------------- 109

  Fly   321 DDEFTDDDADYEENDNVKSPDTSSAESSDCTENDDDGDEDGNEDSDEEETDEDQMANDNFCANMI 385
            ||:|..|                                                          
pombe   110 DDQFHTD---------------------------------------------------------- 116

  Fly   386 EEPGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVT 450
                 .|||||.|.|..|..||.|||||||.|:...|.|..:|.||||.::.|.:||..|||.|.
pombe   117 -----PSGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVD 176

  Fly   451 LDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSE 515
            . |||||.|.||||:||..:| |..|..|:|:::||||:....||.:|||:||||||||:..:|:
pombe   177 F-GRVNGNLALSRAIGDFEFK-NSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQ 239

  Fly   516 EVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQ----------FKKKLQE 570
            :|:||||..:.....|..|.|.|.|||:|.:|...|.||||||..||.          :||....
pombe   240 QVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDNMTVCIVALLQENDKSAWYKKIADR 304

  Fly   571 LQST----IPPNQTED------------KLLKTSENVSHSLNDQSASKRCASQNADADDEI---- 615
            :.:.    .||...|:            |::.........||......:.|::|:..||..    
pombe   305 VAANDGPCAPPEYAENHGPGWRSGDNNKKVIVPPNFHQVKLNGSDGYDKDANENSKEDDSTNGSL 369

  Fly   616 --------------LEKNNSKRLKTDLEQENIKD 635
                          .|:.||.. :||:...| ||
pombe   370 AAGFRWKEHFFPHKAEEENSSS-ETDIVNSN-KD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 40/86 (47%)
PP2Cc <374..564 CDD:238083 90/199 (45%)
ptc3NP_593087.1 PP2C 24..275 CDD:278884 127/531 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 1 1.100 - - LDO PTHR13832
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1847
TreeFam 00.000 Not matched by this tool.
54.810

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